Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 AC110792.3-201ENST00000595906 1614 ntBASIC4.66□□□□□ -1.66
RPRD1AQ96P16 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 FCF1P5-201ENST00000406490 482 ntBASIC4.66□□□□□ -1.66
RPRD1AQ96P16 MTCYBP7-201ENST00000419540 1134 ntBASIC4.66□□□□□ -1.66
RPRD1AQ96P16 AL158073.1-201ENST00000426848 1104 ntBASIC4.66□□□□□ -1.66
RPRD1AQ96P16 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 RPL23AP4-201ENST00000427757 463 ntBASIC4.66□□□□□ -1.66
RPRD1AQ96P16 AP001324.1-201ENST00000428553 399 ntBASIC4.66□□□□□ -1.66
RPRD1AQ96P16 RPL12P28-201ENST00000430852 489 ntBASIC4.66□□□□□ -1.66
RPRD1AQ96P16 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 MTND2P2-201ENST00000434633 945 ntBASIC4.66□□□□□ -1.66
RPRD1AQ96P16 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 CASP3P1-201ENST00000446037 609 ntBASIC4.66□□□□□ -1.66
RPRD1AQ96P16 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 HMGN1P8-201ENST00000463578 288 ntBASIC4.66□□□□□ -1.66
RPRD1AQ96P16 AC112206.1-201ENST00000468416 477 ntBASIC4.66□□□□□ -1.66
RPRD1AQ96P16 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 AC108751.2-201ENST00000469993 231 ntBASIC4.66□□□□□ -1.66
RPRD1AQ96P16 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 RN7SKP46-201ENST00000515942 234 ntBASIC4.66□□□□□ -1.66
RPRD1AQ96P16 RAB9BP1-201ENST00000519581 626 ntBASIC4.66□□□□□ -1.66
RPRD1AQ96P16 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 AC008966.2-201ENST00000606157 453 ntBASIC4.66□□□□□ -1.66
RPRD1AQ96P16 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 AC125257.1-201ENST00000560400 2930 ntBASIC4.66□□□□□ -1.66
RPRD1AQ96P16 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RPRD1AQ96P16 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
RPRD1AQ96P16 AC007390.2-201ENST00000606229 3803 ntBASIC4.65□□□□□ -1.66
RPRD1AQ96P16 CPHL1P-201ENST00000461341 3407 ntBASIC4.65□□□□□ -1.66
RPRD1AQ96P16 AL133268.1-201ENST00000405676 1401 ntBASIC4.65□□□□□ -1.66
RPRD1AQ96P16 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
RPRD1AQ96P16 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
RPRD1AQ96P16 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.65□□□□□ -1.66
RPRD1AQ96P16 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RPRD1AQ96P16 IGKV7-3-201ENST00000357453 298 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 RNU6-386P-201ENST00000362650 107 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 RNU1-32P-201ENST00000363937 159 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 MT-TP-201ENST00000387461 68 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 AL034403.1-201ENST00000399414 885 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 Y_RNA.625-201ENST00000411256 107 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.65□□□□□ -1.67
RPRD1AQ96P16 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RPRD1AQ96P16 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RPRD1AQ96P16 RAD23BP1-201ENST00000421404 1227 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RPRD1AQ96P16 H2AFZP6-201ENST00000444403 394 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 AC133473.1-201ENST00000455173 299 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 APOOP2-201ENST00000461561 539 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.65□□□□□ -1.67
RPRD1AQ96P16 RPS4XP18-201ENST00000495480 763 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 PPM1AP1-201ENST00000502740 1135 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.65□□□□□ -1.67
RPRD1AQ96P16 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.65□□□□□ -1.67
RPRD1AQ96P16 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.65□□□□□ -1.67
RPRD1AQ96P16 SEC11B-201ENST00000518383 499 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.65□□□□□ -1.67
RPRD1AQ96P16 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.65□□□□□ -1.67
RPRD1AQ96P16 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.65□□□□□ -1.67
RPRD1AQ96P16 AL049874.4-201ENST00000557593 255 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 MIR5096-201ENST00000583713 70 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 AC023762.1-201ENST00000603280 584 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 AC115286.1-201ENST00000604298 434 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 IMMP1LP1-201ENST00000605170 488 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 AC090948.2-201ENST00000607363 564 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 AC020634.1-201ENST00000608701 549 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 AC012409.3-201ENST00000611343 981 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 MIR7641-1-201ENST00000627518 61 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RPRD1AQ96P16 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.65□□□□□ -1.67
RPRD1AQ96P16 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RPRD1AQ96P16 LINC00622-201ENST00000562811 1570 ntBASIC4.65□□□□□ -1.67
RPRD1AQ96P16 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
RPRD1AQ96P16 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RPRD1AQ96P16 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
RPRD1AQ96P16 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RPRD1AQ96P16 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
RPRD1AQ96P16 MFSD8-242ENST00000641690 4199 ntBASIC4.64□□□□□ -1.67
RPRD1AQ96P16 AC087565.3-202ENST00000642085 1603 ntBASIC4.64□□□□□ -1.67
RPRD1AQ96P16 AC025031.4-201ENST00000621248 3271 ntBASIC4.64□□□□□ -1.67
RPRD1AQ96P16 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPRD1AQ96P16 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPRD1AQ96P16 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RPRD1AQ96P16 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms