Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 CDC42P3-201ENST00000518493 633 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 AC095057.3-201ENST00000567102 1157 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 MIR4489-201ENST00000578869 62 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 SUGT1P3-202ENST00000604259 383 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 AC024257.5-201ENST00000612739 531 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 AP002782.1-201ENST00000623107 614 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 U6.107-201ENST00000637108 79 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 LINC02211-204ENST00000642024 1070 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 SCARNA15-201ENST00000607520 4325 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS50Q96JG6 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS50Q96JG6 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS50Q96JG6 AC073055.1-201ENST00000456901 1621 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS50Q96JG6 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS50Q96JG6 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS50Q96JG6 GTF2H2B-203ENST00000508065 1432 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS50Q96JG6 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS50Q96JG6 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS50Q96JG6 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS50Q96JG6 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS50Q96JG6 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 RNU4-92P-201ENST00000363783 136 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS50Q96JG6 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS50Q96JG6 AL035419.1-201ENST00000397037 564 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 AL049545.1-201ENST00000401856 572 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC009302.1-201ENST00000417147 390 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 HMGB1P49-201ENST00000418882 569 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 SLC35E1P1-201ENST00000419313 864 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 AL365338.1-201ENST00000422282 858 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC012075.1-201ENST00000436549 580 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 AL390119.1-201ENST00000440329 312 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 AL592437.1-201ENST00000443781 492 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 OR6K5P-201ENST00000447050 945 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VPS50Q96JG6 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 VDAC2P4-201ENST00000452925 711 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 RPL7P48-201ENST00000461513 746 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC027308.1-201ENST00000517993 110 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC092709.1-201ENST00000521355 1045 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC083923.1-201ENST00000523708 376 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VPS50Q96JG6 OR10G5P-201ENST00000532733 358 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 MTCYBP27-201ENST00000555160 670 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC040958.1-201ENST00000561102 201 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC027104.1-201ENST00000563702 681 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 MIR548Y-201ENST00000582739 110 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 RN7SL435P-201ENST00000584418 282 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VPS50Q96JG6 OR7E18P-201ENST00000592589 702 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 IMMP1LP3-201ENST00000604197 224 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 AL512329.2-201ENST00000607350 548 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC211433.2-201ENST00000608433 387 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC007204.2-201ENST00000615022 616 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 AC091932.2-201ENST00000623014 291 ntBASIC5.22□□□□□ -1.57
VPS50Q96JG6 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VPS50Q96JG6 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS50Q96JG6 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VPS50Q96JG6 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
VPS50Q96JG6 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.21□□□□□ -1.57
VPS50Q96JG6 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.57
VPS50Q96JG6 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
VPS50Q96JG6 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
VPS50Q96JG6 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
VPS50Q96JG6 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VPS50Q96JG6 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms