Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 UBE2V1P11-201ENST00000411559 285 ntBASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 OR2AM1P-201ENST00000422137 422 ntBASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 SUMO2P1-206ENST00000445436 284 ntBASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 OR52J1P-201ENST00000450596 932 ntBASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 AC025164.1-201ENST00000496249 478 ntBASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 AC147055.3-201ENST00000510547 851 ntBASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 OR8K2P-201ENST00000524645 927 ntBASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 AC133555.2-201ENST00000550213 292 ntBASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 HMGB3P26-201ENST00000560051 582 ntBASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 BGLT3-201ENST00000564523 994 ntBASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 MTND4LP24-201ENST00000572277 291 ntBASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 OR7E18P-201ENST00000592589 702 ntBASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 FAM27B-201ENST00000610601 213 ntBASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 AC068870.2-201ENST00000620635 389 ntBASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 AC020978.9-201ENST00000624380 1141 ntBASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 AP002371.2-201ENST00000624450 503 ntBASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 AP003072.4-201ENST00000624580 310 ntBASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 MAPK10-286ENST00000641208 8747 ntBASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM5Q96HC4 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.65□□□□□ -1.66
PDLIM5Q96HC4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
PDLIM5Q96HC4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
PDLIM5Q96HC4 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PDLIM5Q96HC4 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PDLIM5Q96HC4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.65□□□□□ -1.66
PDLIM5Q96HC4 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 MIR921-201ENST00000401133 56 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 AL080315.1-201ENST00000406055 466 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 AL353692.2-201ENST00000407054 335 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 SPTLC1P2-201ENST00000407089 121 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 UBE2V1P15-201ENST00000407776 448 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 RN7SKP199-201ENST00000410325 305 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 DPPA2P3-201ENST00000411853 655 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 TCEA1P4-201ENST00000415066 844 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 AC234782.4-201ENST00000417646 1048 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 LINC01347-201ENST00000417964 355 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 AL390879.2-203ENST00000426943 1121 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 RPL7P29-201ENST00000437151 728 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 TPTE2P6-202ENST00000445572 1007 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 RPS6P2-201ENST00000454208 705 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 MTND2P6-201ENST00000455337 1030 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 RN7SL177P-201ENST00000476596 299 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 BTF3P13-201ENST00000513224 490 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 SETP12-201ENST00000514068 805 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 AC006518.1-201ENST00000541449 943 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 AC063949.1-201ENST00000552900 865 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 AC022893.2-201ENST00000564832 3296 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 SAMMSON-226ENST00000642089 1582 ntBASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PDLIM5Q96HC4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms