Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
VPS33AQ96AX1 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
VPS33AQ96AX1 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 RNU6-1339P-201ENST00000363574 91 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 MTND2P15-201ENST00000418575 892 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 MTCO2P1-201ENST00000424648 477 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 ELOCP11-201ENST00000436690 332 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 RPS26P2-201ENST00000440331 348 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AL158053.1-201ENST00000441503 453 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 ELOCP16-201ENST00000444494 332 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AC108751.2-201ENST00000469993 231 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 TPT1P3-201ENST00000492841 512 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AC104108.1-201ENST00000509930 412 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 NPM1P6-201ENST00000521088 871 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AC022790.1-201ENST00000522872 204 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AC087477.6-201ENST00000559595 843 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AC095057.3-201ENST00000567102 1157 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 RN7SL176P-201ENST00000580352 264 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AC105254.2-201ENST00000603636 436 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AC133552.5-201ENST00000604266 540 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AC017076.1-201ENST00000607613 578 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AL049794.2-201ENST00000616301 365 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 LINC00901.1-201ENST00000617252 152 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AC119744.1-201ENST00000454746 1715 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS33AQ96AX1 AC104446.1-201ENST00000613728 1321 ntBASIC4.71□□□□□ -1.66
VPS33AQ96AX1 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AL139811.1-201ENST00000424779 2299 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 RNU1-94P-201ENST00000362627 173 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 RNA5SP242-201ENST00000364171 118 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 RNA5SP132-201ENST00000364725 118 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 RNU1-43P-201ENST00000365052 165 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 MIR621-201ENST00000384919 96 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AL512422.1-201ENST00000407033 553 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 RNA5SP178-201ENST00000410380 128 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 RN7SKP59-201ENST00000410520 314 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 RN7SKP126-201ENST00000411143 300 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AL513325.1-201ENST00000417716 1034 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 E2F6P2-201ENST00000420708 748 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AC092162.1-201ENST00000432828 434 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AC023347.2-201ENST00000433994 462 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AL138899.2-201ENST00000439139 499 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AC009263.1-201ENST00000441193 1239 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AL357520.1-201ENST00000441557 453 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 HMGB3P9-201ENST00000441799 583 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 OTX2P1-201ENST00000450956 354 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 OR52E7P-201ENST00000452394 933 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AC096992.1-201ENST00000459808 709 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 RN7SL517P-201ENST00000462240 305 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 AC092905.1-201ENST00000467527 949 ntBASIC4.7□□□□□ -1.66
VPS33AQ96AX1 RPS4XP1-201ENST00000482189 787 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms