Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTP4A1Q93096 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTP4A1Q93096 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 RNU6-792P-201ENST00000363490 107 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 RNA5SP28-201ENST00000363841 119 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 U3.15-201ENST00000365398 212 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 RNU6-609P-201ENST00000365459 107 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 LRRC37BP1-201ENST00000398851 714 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 GLULP6-201ENST00000399502 913 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTP4A1Q93096 RNA5SP146-201ENST00000410743 123 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 AP000534.2-201ENST00000412729 568 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTP4A1Q93096 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTP4A1Q93096 RPL7P55-201ENST00000450522 746 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 AL691482.1-201ENST00000453255 87 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 RPL23AP37-201ENST00000479658 549 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 RPS4XP1-201ENST00000482189 787 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 AC098799.3-201ENST00000506095 438 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 AC008494.2-201ENST00000514544 370 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 AC027338.1-201ENST00000514840 825 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTP4A1Q93096 SERPINE4P-201ENST00000554978 281 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 AL049830.4-201ENST00000555149 351 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 ELOCP28-201ENST00000590044 317 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 IMMP1LP3-201ENST00000604197 224 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 MIR6862-1-201ENST00000613016 70 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 MIR6862-2-201ENST00000614755 70 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 AC090527.3-201ENST00000619041 548 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 AL035461.2-201ENST00000619201 524 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 AC067852.7-201ENST00000623270 535 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 AC132825.7-201ENST00000638744 335 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 MTCO1P11-201ENST00000429111 1528 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PTP4A1Q93096 AC011493.1-201ENST00000596753 1632 ntBASIC4.5□□□□□ -1.69
PTP4A1Q93096 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTP4A1Q93096 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTP4A1Q93096 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
PTP4A1Q93096 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PTP4A1Q93096 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PTP4A1Q93096 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PTP4A1Q93096 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PTP4A1Q93096 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTP4A1Q93096 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.49□□□□□ -1.69
PTP4A1Q93096 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTP4A1Q93096 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTP4A1Q93096 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTP4A1Q93096 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTP4A1Q93096 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTP4A1Q93096 ASNSP1-204ENST00000641977 1664 ntBASIC4.49□□□□□ -1.69
PTP4A1Q93096 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTP4A1Q93096 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTP4A1Q93096 AL512646.1-201ENST00000269395 1077 ntBASIC4.49□□□□□ -1.69
PTP4A1Q93096 IL6STP1-201ENST00000346911 1020 ntBASIC4.49□□□□□ -1.69
PTP4A1Q93096 RNU6-543P-201ENST00000362576 108 ntBASIC4.49□□□□□ -1.69
PTP4A1Q93096 RNU1-43P-201ENST00000365052 165 ntBASIC4.49□□□□□ -1.69
PTP4A1Q93096 MIR525-201ENST00000384978 85 ntBASIC4.49□□□□□ -1.69
PTP4A1Q93096 MIR223-201ENST00000385204 110 ntBASIC4.49□□□□□ -1.69
PTP4A1Q93096 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PTP4A1Q93096 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTP4A1Q93096 ATF1P1-201ENST00000406040 927 ntBASIC4.49□□□□□ -1.69
PTP4A1Q93096 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.49□□□□□ -1.69
PTP4A1Q93096 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.49□□□□□ -1.69
PTP4A1Q93096 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.49□□□□□ -1.69
PTP4A1Q93096 RPL35AP24-201ENST00000413846 330 ntBASIC4.49□□□□□ -1.69
PTP4A1Q93096 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.49□□□□□ -1.69
PTP4A1Q93096 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.49□□□□□ -1.69
PTP4A1Q93096 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.49□□□□□ -1.69
PTP4A1Q93096 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.49□□□□□ -1.69
PTP4A1Q93096 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.49□□□□□ -1.69
PTP4A1Q93096 RN7SL172P-201ENST00000460535 303 ntBASIC4.49□□□□□ -1.69
PTP4A1Q93096 AC092905.1-201ENST00000467527 949 ntBASIC4.49□□□□□ -1.69
PTP4A1Q93096 RN7SL799P-201ENST00000475891 298 ntBASIC4.49□□□□□ -1.69
PTP4A1Q93096 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.49□□□□□ -1.69
PTP4A1Q93096 RN7SL205P-201ENST00000490174 284 ntBASIC4.49□□□□□ -1.69
PTP4A1Q93096 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.49□□□□□ -1.69
PTP4A1Q93096 AC010374.1-201ENST00000503762 1237 ntBASIC4.49□□□□□ -1.69
PTP4A1Q93096 HPRT1P2-201ENST00000505250 544 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms