Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC234781.3-201ENST00000452540 973 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 NPM1P13-201ENST00000452663 865 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AL445669.2-201ENST00000454425 421 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AC105031.1-201ENST00000518550 476 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AC010306.1-201ENST00000523223 1117 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 MRPS35P3-201ENST00000603189 709 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AC121247.2-201ENST00000604776 136 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AL021707.7-201ENST00000607991 416 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AC015982.1-201ENST00000608113 465 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 Z95327.3-201ENST00000610385 572 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AL450489.1-201ENST00000612071 468 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AL392048.1-201ENST00000613946 534 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 OR8G7P-201ENST00000616658 848 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AC126175.1-201ENST00000617041 758 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AC092140.2-201ENST00000618027 521 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AL603755.1-201ENST00000619504 163 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AC241377.1-201ENST00000619797 406 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AC007490.1-201ENST00000624321 703 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 ZNF663P-202ENST00000641770 1131 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 Z98755.1-201ENST00000407015 1384 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AC005261.4-201ENST00000600047 1385 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 NACA3P-201ENST00000359690 648 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 RN7SKP15-201ENST00000364742 309 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 RNU5A-2P-201ENST00000384337 116 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC013442.1-201ENST00000397347 228 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AL079342.2-201ENST00000403367 482 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 RNU4-72P-201ENST00000410754 173 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 RPL35AP24-201ENST00000413846 330 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC007738.1-201ENST00000413892 348 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 NANOGP4-201ENST00000427230 913 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 BX323845.1-201ENST00000432417 179 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 HMGB3P10-201ENST00000434734 572 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AURKAPS1-201ENST00000451805 1212 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC016724.1-201ENST00000453215 421 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AL356981.1-201ENST00000454879 684 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 NECAP1P2-201ENST00000455668 727 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 TPTE2P5-203ENST00000458118 728 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 PPIAP19-201ENST00000486414 492 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC020937.1-201ENST00000519677 1013 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AP003461.1-201ENST00000528866 78 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 MTCO1P40-201ENST00000574371 625 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 MIR3614-201ENST00000581261 86 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 MIR4433B-201ENST00000581329 102 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC125494.3-201ENST00000602759 455 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC069307.1-201ENST00000602820 447 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AL392112.1-201ENST00000605115 829 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 RPSAP73-201ENST00000614820 330 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms