Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RPS18P6-201ENST00000476880 458 ntBASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 ARL4AP1-201ENST00000503220 705 ntBASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AC110760.3-202ENST00000515177 371 ntBASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AC090666.1-201ENST00000578241 445 ntBASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AC008507.2-201ENST00000588402 1176 ntBASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AL121932.1-201ENST00000605542 214 ntBASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AL356274.1-201ENST00000617064 410 ntBASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AC004232.3-201ENST00000622977 525 ntBASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AC099654.8-201ENST00000637757 681 ntBASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 THAP12P4-201ENST00000528321 2266 ntBASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AP000542.2-201ENST00000623199 6179 ntBASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 HSPD1P11-201ENST00000508643 1702 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 SNORD56.4-201ENST00000363883 71 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 SNORA58B-201ENST00000364259 136 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 RNA5SP428-201ENST00000365129 132 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 RNU6-481P-201ENST00000384194 107 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 MIR195-201ENST00000385194 87 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 MIR921-201ENST00000401133 56 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 UBE2V1P9-201ENST00000414760 368 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 AC016769.2-201ENST00000414815 475 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 AC007394.1-201ENST00000421941 531 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 PPIAP13-201ENST00000434706 478 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 ARL4AP3-201ENST00000441452 574 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 AL137845.2-201ENST00000444292 988 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 AC069540.1-201ENST00000446320 988 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 CYCSP42-201ENST00000450823 238 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 PSMC1P13-201ENST00000458195 985 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 TPT1P3-201ENST00000492841 512 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 RN7SL808P-201ENST00000496066 299 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 TRAV31-201ENST00000502780 342 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 SNRPCP2-201ENST00000504370 475 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 CDH12P2-201ENST00000504393 298 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 RPS27AP18-201ENST00000515536 459 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 RNU6-1308P-201ENST00000516817 103 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 AC013701.1-201ENST00000522657 465 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 RPL21P7-201ENST00000557463 483 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 AC015912.2-201ENST00000571053 181 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 MTND1P8-201ENST00000571424 950 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 MIR3691-201ENST00000578066 90 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 AC209154.1-201ENST00000582156 337 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 AC091057.3-201ENST00000602684 733 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 AC012557.1-201ENST00000607115 611 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 AL445222.1-201ENST00000607259 628 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 AC027449.1-201ENST00000608890 407 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 uc_338.18-201ENST00000615451 175 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 AL359757.1-201ENST00000623176 255 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 AC073342.3-201ENST00000624211 193 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 DDX18P4-201ENST00000511690 1966 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 ZNF733P-202ENST00000444809 1573 ntBASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
SLC44A1Q8WWI5 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms