Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC120349.2-201ENST00000625002 298 ntBASIC5.73□□□□□ -1.49
NUP43Q8NFH3 MIR6863-201ENST00000636112 90 ntBASIC5.73□□□□□ -1.49
NUP43Q8NFH3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
NUP43Q8NFH3 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUP43Q8NFH3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUP43Q8NFH3 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NUP43Q8NFH3 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NUP43Q8NFH3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUP43Q8NFH3 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.73□□□□□ -1.49
NUP43Q8NFH3 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NUP43Q8NFH3 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
NUP43Q8NFH3 CYP1D1P-201ENST00000416662 1433 ntBASIC5.73□□□□□ -1.49
NUP43Q8NFH3 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUP43Q8NFH3 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
NUP43Q8NFH3 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NUP43Q8NFH3 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUP43Q8NFH3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 DNM1P47-203ENST00000571780 12667 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 OR4K15-201ENST00000305051 1216 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 Y_RNA.97-201ENST00000363094 102 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 RNU6-1066P-201ENST00000363573 105 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 RNU6-723P-201ENST00000383973 107 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 CALM2P3-201ENST00000400429 449 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 RPL23AP17-201ENST00000401064 499 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AC109780.2-201ENST00000413467 845 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AL356583.2-201ENST00000426536 280 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 RPL23AP4-201ENST00000427757 463 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AC005033.1-201ENST00000428904 813 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AL513175.1-201ENST00000431492 780 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 RPL39P6-201ENST00000448289 150 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AC013828.1-201ENST00000481845 158 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AC005017.1-201ENST00000482002 490 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 RPL12P30-201ENST00000488389 499 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 ZNF519P4-201ENST00000514008 125 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 RNU6-885P-201ENST00000516607 104 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 MTCO2P4-201ENST00000517968 247 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AC008429.4-201ENST00000521201 182 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AC138832.1-201ENST00000522871 556 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AK6P1-201ENST00000540219 478 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AC008083.2-201ENST00000546707 476 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AP005119.2-201ENST00000579735 1105 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AP004247.3-201ENST00000608682 624 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AL359535.1-201ENST00000612100 1087 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 AC136475.10-201ENST00000620253 385 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.72□□□□□ -1.49
NUP43Q8NFH3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP43Q8NFH3 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
NUP43Q8NFH3 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.71□□□□□ -1.49
NUP43Q8NFH3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
NUP43Q8NFH3 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
NUP43Q8NFH3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms