Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AC009117.1-201ENST00000563948 554 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 MIR4691-201ENST00000583764 85 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AP001981.2-201ENST00000603241 418 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AL031320.1-201ENST00000604177 357 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AC005377.1-201ENST00000605126 456 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AC072039.2-201ENST00000608883 439 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AL133370.2-201ENST00000619934 439 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AC092747.4-201ENST00000620519 1861 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AC079248.2-201ENST00000623779 326 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AC073869.8-201ENST00000641806 335 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 AC114774.1-201ENST00000507410 1770 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 FAM133CP-201ENST00000332869 704 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 RNU6-398P-201ENST00000384143 109 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 RNU6-31P-201ENST00000384388 108 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 RPS3AP26-201ENST00000398259 784 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 AL021407.1-201ENST00000404531 386 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 DDX39BP1-205ENST00000422507 192 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 EI24P4-201ENST00000423683 1078 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 AC234781.2-201ENST00000426370 994 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 C4BPAP2-201ENST00000428434 478 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 HSPD1P12-201ENST00000429127 1069 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 MTCO2P16-201ENST00000436962 677 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 MTND5P2-201ENST00000442927 1142 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 HMGB3P6-201ENST00000444896 598 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 IGBP1P3-201ENST00000447449 1000 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 MRPL35P2-201ENST00000448009 511 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 NPM1P49-201ENST00000448027 714 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 AC096741.1-201ENST00000472250 846 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 RPS26P24-201ENST00000497656 331 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 AC012400.1-201ENST00000518452 381 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 SETP1-201ENST00000556014 845 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 MIR4270-201ENST00000581799 70 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 RN7SL356P-201ENST00000582228 248 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 AP000769.2-201ENST00000602344 396 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 AP000811.1-201ENST00000603803 651 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 AC107304.1-201ENST00000604229 296 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 AL133243.1-201ENST00000614487 366 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 NXF4-202ENST00000416098 1465 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 AC104446.1-201ENST00000613728 1321 ntBASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A3Q8N4M1 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms