Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.68□□□□□ -1.34
DEPDC4Q8N2C3 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
DEPDC4Q8N2C3 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
DEPDC4Q8N2C3 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.68□□□□□ -1.34
DEPDC4Q8N2C3 AC100810.3-201ENST00000633189 2240 ntBASIC6.68□□□□□ -1.34
DEPDC4Q8N2C3 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
DEPDC4Q8N2C3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
DEPDC4Q8N2C3 MAPK10-261ENST00000641050 3109 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AL022323.4-201ENST00000623980 13120 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AC013488.1-201ENST00000526618 1838 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AC074375.1-201ENST00000372993 192 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AC093107.1-201ENST00000422772 609 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AC079807.1-201ENST00000429993 481 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 RPL23AP30-201ENST00000432419 501 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AC003989.1-201ENST00000434569 565 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 HIST1H2APS6-201ENST00000448609 364 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 MRPS17P3-201ENST00000465453 385 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 RN7SL861P-201ENST00000473793 285 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 RN7SL549P-201ENST00000478997 282 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AL163973.1-201ENST00000484753 577 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 EIF4EP3-201ENST00000498782 656 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 RNA5SP337-201ENST00000517007 109 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 IGKV2-29-201ENST00000521304 372 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 SNX18P27-201ENST00000523611 779 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 OR5F2P-201ENST00000532761 941 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AC103855.4-201ENST00000533158 265 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AC027667.1-201ENST00000545814 304 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 MIR3146-201ENST00000580367 79 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AC090948.1-201ENST00000607464 549 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AC087893.2-201ENST00000623272 255 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 SNORA43.5-201ENST00000631270 138 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AC134503.1-201ENST00000633048 54 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 ATM-228ENST00000639240 498 ntTSL 5 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AC010329.2-201ENST00000595195 2737 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 AL596244.1-201ENST00000567068 3779 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 EEF1A1P26-201ENST00000458319 1363 ntBASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
DEPDC4Q8N2C3 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
DEPDC4Q8N2C3 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
DEPDC4Q8N2C3 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
DEPDC4Q8N2C3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
DEPDC4Q8N2C3 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.66□□□□□ -1.34
DEPDC4Q8N2C3 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
DEPDC4Q8N2C3 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.66□□□□□ -1.34
DEPDC4Q8N2C3 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
DEPDC4Q8N2C3 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
DEPDC4Q8N2C3 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
DEPDC4Q8N2C3 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.66□□□□□ -1.34
DEPDC4Q8N2C3 PROS2P-201ENST00000474651 1951 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms