Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE4Q8N205 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE4Q8N205 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE4Q8N205 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE4Q8N205 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 Y_RNA.169-201ENST00000363745 96 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 MIR1302-8-201ENST00000408342 128 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 RPL22P18-201ENST00000417197 377 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 AL592293.2-201ENST00000422292 996 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 RPEP3-201ENST00000425462 676 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 MTND1P20-201ENST00000430341 950 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 AC010153.1-201ENST00000432862 727 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE4Q8N205 MTCYBP29-201ENST00000436327 1006 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 MED6P1-201ENST00000439659 713 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 GAPDHP14-201ENST00000450472 937 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE4Q8N205 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 AC013356.1-201ENST00000489027 564 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 LAMTOR3P2-201ENST00000504479 232 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 AC091868.1-201ENST00000508746 304 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 ASNSP4-201ENST00000511103 447 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 RNU6-319P-201ENST00000516025 108 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 ZNF321P-202ENST00000550843 495 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 MIR4675-201ENST00000577898 77 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 AL356218.2-201ENST00000605264 187 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 AC107952.2-201ENST00000606048 486 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 AC010857.1-201ENST00000606398 594 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 MIR3974-201ENST00000637126 96 ntBASIC6.07□□□□□ -1.44
SYNE4Q8N205 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE4Q8N205 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SYNE4Q8N205 MTND4P10-201ENST00000446199 1363 ntBASIC6.06□□□□□ -1.44
SYNE4Q8N205 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.06□□□□□ -1.44
SYNE4Q8N205 AC008758.3-201ENST00000507003 1829 ntBASIC6.06□□□□□ -1.44
SYNE4Q8N205 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SYNE4Q8N205 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SYNE4Q8N205 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SYNE4Q8N205 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SYNE4Q8N205 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.06□□□□□ -1.44
SYNE4Q8N205 MTND2P18-201ENST00000419962 1030 ntBASIC6.06□□□□□ -1.44
SYNE4Q8N205 RPL7P33-201ENST00000444159 742 ntBASIC6.06□□□□□ -1.44
SYNE4Q8N205 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC6.06□□□□□ -1.44
SYNE4Q8N205 ARL2BPP10-201ENST00000446487 531 ntBASIC6.06□□□□□ -1.44
SYNE4Q8N205 AC004022.1-201ENST00000447766 1066 ntBASIC6.06□□□□□ -1.44
SYNE4Q8N205 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC6.06□□□□□ -1.44
SYNE4Q8N205 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SYNE4Q8N205 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.06□□□□□ -1.44
SYNE4Q8N205 OR5D2P-201ENST00000524390 911 ntBASIC6.06□□□□□ -1.44
SYNE4Q8N205 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
SYNE4Q8N205 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SYNE4Q8N205 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.06□□□□□ -1.44
SYNE4Q8N205 AC133555.2-201ENST00000550213 292 ntBASIC6.06□□□□□ -1.44
SYNE4Q8N205 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.06□□□□□ -1.44
SYNE4Q8N205 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.06□□□□□ -1.44
SYNE4Q8N205 AC005962.2-201ENST00000611427 652 ntBASIC6.06□□□□□ -1.44
SYNE4Q8N205 AL138960.1-201ENST00000613838 513 ntBASIC6.06□□□□□ -1.44
SYNE4Q8N205 AP003497.2-201ENST00000624220 967 ntBASIC6.06□□□□□ -1.44
SYNE4Q8N205 CR381572.2-201ENST00000624852 397 ntBASIC6.06□□□□□ -1.44
SYNE4Q8N205 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC6.06□□□□□ -1.44
SYNE4Q8N205 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.06□□□□□ -1.44
SYNE4Q8N205 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SYNE4Q8N205 AL137100.1-201ENST00000556703 1620 ntBASIC6.06□□□□□ -1.44
SYNE4Q8N205 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SYNE4Q8N205 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SYNE4Q8N205 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SYNE4Q8N205 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SYNE4Q8N205 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SYNE4Q8N205 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SYNE4Q8N205 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SYNE4Q8N205 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.05□□□□□ -1.44
SYNE4Q8N205 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SYNE4Q8N205 RNU4-28P-201ENST00000364739 141 ntBASIC6.05□□□□□ -1.44
SYNE4Q8N205 Y_RNA.505-201ENST00000384489 102 ntBASIC6.05□□□□□ -1.44
SYNE4Q8N205 RN7SKP97-201ENST00000410966 333 ntBASIC6.05□□□□□ -1.44
SYNE4Q8N205 ELOCP19-201ENST00000411919 318 ntBASIC6.05□□□□□ -1.44
SYNE4Q8N205 AL158050.1-201ENST00000416077 457 ntBASIC6.05□□□□□ -1.44
SYNE4Q8N205 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC6.05□□□□□ -1.44
SYNE4Q8N205 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.05□□□□□ -1.44
SYNE4Q8N205 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.05□□□□□ -1.44
SYNE4Q8N205 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.05□□□□□ -1.44
SYNE4Q8N205 MUPP-201ENST00000438111 566 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms