Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC016687.1-201ENST00000482574 353 ntBASIC5.39□□□□□ -1.55
CTR9Q6PD62 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.39□□□□□ -1.55
CTR9Q6PD62 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.39□□□□□ -1.55
CTR9Q6PD62 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.39□□□□□ -1.55
CTR9Q6PD62 AC009643.1-201ENST00000532030 391 ntBASIC5.39□□□□□ -1.55
CTR9Q6PD62 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTR9Q6PD62 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTR9Q6PD62 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTR9Q6PD62 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.39□□□□□ -1.55
CTR9Q6PD62 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.39□□□□□ -1.55
CTR9Q6PD62 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTR9Q6PD62 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.39□□□□□ -1.55
CTR9Q6PD62 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.39□□□□□ -1.55
CTR9Q6PD62 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTR9Q6PD62 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTR9Q6PD62 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTR9Q6PD62 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTR9Q6PD62 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTR9Q6PD62 AC018529.3-201ENST00000624212 2254 ntBASIC5.38□□□□□ -1.55
CTR9Q6PD62 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTR9Q6PD62 MIR448-201ENST00000362131 111 ntBASIC5.38□□□□□ -1.55
CTR9Q6PD62 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 EIF4A1P3-201ENST00000411521 244 ntBASIC5.38□□□□□ -1.55
CTR9Q6PD62 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 RAD23BP1-201ENST00000421404 1227 ntBASIC5.38□□□□□ -1.55
CTR9Q6PD62 AL356387.2-201ENST00000422272 243 ntBASIC5.38□□□□□ -1.55
CTR9Q6PD62 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 ARL4AP4-201ENST00000434170 518 ntBASIC5.38□□□□□ -1.55
CTR9Q6PD62 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 AL357520.1-201ENST00000441557 453 ntBASIC5.38□□□□□ -1.55
CTR9Q6PD62 EIF2S2P2-201ENST00000447161 982 ntBASIC5.38□□□□□ -1.55
CTR9Q6PD62 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 AC108751.2-201ENST00000469993 231 ntBASIC5.38□□□□□ -1.55
CTR9Q6PD62 RN7SL809P-201ENST00000482040 297 ntBASIC5.38□□□□□ -1.55
CTR9Q6PD62 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 HPRT1P1-201ENST00000509498 657 ntBASIC5.38□□□□□ -1.55
CTR9Q6PD62 VWA8P1-201ENST00000510889 176 ntBASIC5.38□□□□□ -1.55
CTR9Q6PD62 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 AC009268.1-201ENST00000561352 1203 ntBASIC5.38□□□□□ -1.55
CTR9Q6PD62 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 MIR4284-201ENST00000578924 81 ntBASIC5.38□□□□□ -1.55
CTR9Q6PD62 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 AC015813.4-201ENST00000610469 179 ntBASIC5.38□□□□□ -1.55
CTR9Q6PD62 MIR6758-201ENST00000620653 63 ntBASIC5.38□□□□□ -1.55
CTR9Q6PD62 AL356121.2-201ENST00000624715 780 ntBASIC5.38□□□□□ -1.55
CTR9Q6PD62 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 AL672167.1-205ENST00000641112 3080 ntBASIC5.38□□□□□ -1.55
CTR9Q6PD62 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTR9Q6PD62 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTR9Q6PD62 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.38□□□□□ -1.55
CTR9Q6PD62 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.37□□□□□ -1.55
CTR9Q6PD62 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.37□□□□□ -1.55
CTR9Q6PD62 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTR9Q6PD62 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CTR9Q6PD62 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTR9Q6PD62 RNU1-130P-201ENST00000363930 160 ntBASIC5.37□□□□□ -1.55
CTR9Q6PD62 RNU6-670P-201ENST00000364312 104 ntBASIC5.37□□□□□ -1.55
CTR9Q6PD62 RPL23AP48-201ENST00000406913 488 ntBASIC5.37□□□□□ -1.55
CTR9Q6PD62 TMSB10P2-201ENST00000416049 131 ntBASIC5.37□□□□□ -1.55
CTR9Q6PD62 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.37□□□□□ -1.55
CTR9Q6PD62 RCC2P2-201ENST00000422174 918 ntBASIC5.37□□□□□ -1.55
CTR9Q6PD62 RPL12P34-201ENST00000424532 479 ntBASIC5.37□□□□□ -1.55
CTR9Q6PD62 RPS12P10-201ENST00000427031 377 ntBASIC5.37□□□□□ -1.55
CTR9Q6PD62 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.37□□□□□ -1.55
CTR9Q6PD62 RAB9AP5-201ENST00000437794 597 ntBASIC5.37□□□□□ -1.55
CTR9Q6PD62 RAB9AP2-201ENST00000443911 597 ntBASIC5.37□□□□□ -1.55
CTR9Q6PD62 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CTR9Q6PD62 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.37□□□□□ -1.55
CTR9Q6PD62 RPL5P30-201ENST00000465511 891 ntBASIC5.37□□□□□ -1.55
CTR9Q6PD62 AK4P6-201ENST00000505168 528 ntBASIC5.37□□□□□ -1.55
CTR9Q6PD62 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.37□□□□□ -1.55
CTR9Q6PD62 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.37□□□□□ -1.55
CTR9Q6PD62 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.37□□□□□ -1.55
CTR9Q6PD62 HMGB3P26-201ENST00000560051 582 ntBASIC5.37□□□□□ -1.55
CTR9Q6PD62 ADAD1P2-201ENST00000588476 646 ntBASIC5.37□□□□□ -1.55
CTR9Q6PD62 IMMP1LP1-201ENST00000605170 488 ntBASIC5.37□□□□□ -1.55
CTR9Q6PD62 AC020634.1-201ENST00000608701 549 ntBASIC5.37□□□□□ -1.55
CTR9Q6PD62 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.37□□□□□ -1.55
CTR9Q6PD62 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.37□□□□□ -1.55
CTR9Q6PD62 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.37□□□□□ -1.55
CTR9Q6PD62 AC055839.1-201ENST00000634467 498 ntBASIC5.37□□□□□ -1.55
CTR9Q6PD62 LINC01808-202ENST00000641680 1116 ntBASIC5.37□□□□□ -1.55
CTR9Q6PD62 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
CTR9Q6PD62 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.37□□□□□ -1.55
CTR9Q6PD62 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.37□□□□□ -1.55
CTR9Q6PD62 LINC00622-201ENST00000562811 1570 ntBASIC5.37□□□□□ -1.55
CTR9Q6PD62 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
CTR9Q6PD62 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.36□□□□□ -1.55
CTR9Q6PD62 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CTR9Q6PD62 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms