Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 RNA5SP72-201ENST00000364442 117 ntBASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 SNORD3H-201ENST00000384486 214 ntBASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 AL049781.1-201ENST00000623195 3585 ntBASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 AL929601.4-201ENST00000613011 1341 ntBASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 RN7SKP156-201ENST00000410308 342 ntBASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 AC017079.2-201ENST00000416102 485 ntBASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 KRR1P1-201ENST00000419430 803 ntBASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 AC110768.1-201ENST00000509222 400 ntBASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 AC084757.4-201ENST00000616350 526 ntBASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 THAP12P5-201ENST00000405864 2275 ntBASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 AL078604.1-201ENST00000404609 466 ntBASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 AC027176.2-201ENST00000559166 746 ntBASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 AL160281.1-201ENST00000605307 311 ntBASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
VPS13DQ5THJ4 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 MIR483-201ENST00000385070 76 ntBASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 RPL7P2-201ENST00000427639 268 ntBASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 NMNAT1P2-201ENST00000435192 860 ntBASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 AL513548.1-201ENST00000562904 1724 ntBASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 AC236972.1-201ENST00000433225 199 ntBASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 PRDX3P3-201ENST00000447765 522 ntBASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 AL137849.1-201ENST00000604767 169 ntBASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 AC104978.1-201ENST00000449387 391 ntBASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 AC115115.1-201ENST00000449927 248 ntBASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 MIR4325-201ENST00000583049 90 ntBASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 COX6CP4-201ENST00000605798 228 ntBASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 AC140113.4-201ENST00000622087 222 ntBASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 AC138907.10-201ENST00000623708 983 ntBASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 AF001550.2-201ENST00000636643 217 ntBASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 AL035425.3-201ENST00000564206 4996 ntBASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VPS13DQ5THJ4 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VPS13DQ5THJ4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VPS13DQ5THJ4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
VPS13DQ5THJ4 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS13DQ5THJ4 AC090589.1-201ENST00000473109 362 ntBASIC2.72□□□□□ -1.97
VPS13DQ5THJ4 AL358832.1-201ENST00000497800 389 ntBASIC2.72□□□□□ -1.97
VPS13DQ5THJ4 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
VPS13DQ5THJ4 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS13DQ5THJ4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS13DQ5THJ4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS13DQ5THJ4 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms