Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 PSMC1P13-201ENST00000458195 985 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 SETP6-201ENST00000479329 568 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 AC093267.1-201ENST00000489176 961 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 OR5H3P-201ENST00000502817 919 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.14□□□□□ -1.59
USP41Q3LFD5 AC093801.2-201ENST00000503966 1050 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.14□□□□□ -1.59
USP41Q3LFD5 RNU5A-7P-201ENST00000515979 116 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 AC034205.1-201ENST00000520621 638 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 CIR1P1-201ENST00000524055 1133 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 AP000859.1-201ENST00000525536 307 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 OR5M2P-201ENST00000529003 936 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.14□□□□□ -1.59
USP41Q3LFD5 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.14□□□□□ -1.59
USP41Q3LFD5 SNORA74C-1-201ENST00000580726 201 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 RPL26P30-202ENST00000602923 645 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 AF129408.1-201ENST00000608767 431 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 AL356274.1-201ENST00000617064 410 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.14□□□□□ -1.59
USP41Q3LFD5 AC015914.2-201ENST00000618167 288 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 AL022401.1-201ENST00000619498 108 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.14□□□□□ -1.59
USP41Q3LFD5 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.14□□□□□ -1.59
USP41Q3LFD5 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.14□□□□□ -1.59
USP41Q3LFD5 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
USP41Q3LFD5 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.14□□□□□ -1.59
USP41Q3LFD5 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.14□□□□□ -1.59
USP41Q3LFD5 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP41Q3LFD5 AL132640.2-201ENST00000559968 1698 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP41Q3LFD5 AC097461.1-201ENST00000568928 2821 ntBASIC5.14□□□□□ -1.59
USP41Q3LFD5 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP41Q3LFD5 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP41Q3LFD5 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 MTND5P11-201ENST00000511037 1812 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
USP41Q3LFD5 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP41Q3LFD5 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP41Q3LFD5 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
USP41Q3LFD5 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP41Q3LFD5 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP41Q3LFD5 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP41Q3LFD5 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP41Q3LFD5 RNU6-1005P-201ENST00000384519 107 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 RNU6-244P-201ENST00000391028 104 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 FABP12P1-201ENST00000401911 322 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 LINC00993-201ENST00000420453 540 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 FABP7P1-201ENST00000424004 391 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 CENPIP1-201ENST00000425713 902 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 OR2AH1P-201ENST00000425717 928 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
USP41Q3LFD5 CEACAMP6-201ENST00000452007 574 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 RN7SL517P-201ENST00000462240 305 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 AC092905.1-201ENST00000467527 949 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 AC073358.1-201ENST00000505671 684 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 AC108120.2-201ENST00000512973 294 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 RN7SKP141-201ENST00000516167 338 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 RNU2-30P-201ENST00000516209 141 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 RNU1-6P-201ENST00000516290 144 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 AC104115.2-201ENST00000523026 687 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 AL110118.1-201ENST00000553543 400 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 AL390334.1-201ENST00000556395 450 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 RN7SL802P-201ENST00000577858 299 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 MIR5699-201ENST00000578903 90 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 AC126365.2-201ENST00000580630 379 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 AC093765.1-201ENST00000603758 881 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 AL158050.2-201ENST00000605336 568 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 AC074140.1-201ENST00000621617 208 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP41Q3LFD5 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP41Q3LFD5 AC007382.1-201ENST00000624376 2618 ntBASIC5.13□□□□□ -1.59
USP41Q3LFD5 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP41Q3LFD5 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP41Q3LFD5 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP41Q3LFD5 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
USP41Q3LFD5 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP41Q3LFD5 KARSP3-201ENST00000571212 1504 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms