Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 YWHABP2-201ENST00000540201 713 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.46□□□□□ -1.7
SCN1BQ07699 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.46□□□□□ -1.7
SCN1BQ07699 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.46□□□□□ -1.7
SCN1BQ07699 AC011611.5-201ENST00000552477 578 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 NDUFB4P11-201ENST00000560510 395 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 AC023824.3-201ENST00000569003 562 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.46□□□□□ -1.7
SCN1BQ07699 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SCN1BQ07699 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.46□□□□□ -1.7
SCN1BQ07699 HMGB2P1-201ENST00000591146 634 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 MTATP6P2-201ENST00000603319 678 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 BNIP3P4-201ENST00000604946 565 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 AC113194.1-201ENST00000606037 500 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 AC010245.2-201ENST00000606908 1167 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 AC120053.1-201ENST00000607706 736 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 AC009163.6-201ENST00000612367 342 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 AC020978.9-201ENST00000624380 1141 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 AC074101.1-201ENST00000637861 241 ntBASIC4.46□□□□□ -1.7
SCN1BQ07699 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SCN1BQ07699 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCN1BQ07699 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SCN1BQ07699 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.46□□□□□ -1.7
SCN1BQ07699 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.46□□□□□ -1.7
SCN1BQ07699 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.46□□□□□ -1.7
SCN1BQ07699 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCN1BQ07699 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SCN1BQ07699 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SCN1BQ07699 OR52B1P-201ENST00000316506 909 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 MIR133B-201ENST00000362210 119 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 SNORA63.3-201ENST00000362682 132 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 RNU6-984P-201ENST00000363236 109 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 RN7SKP124-201ENST00000364730 341 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.45□□□□□ -1.7
SCN1BQ07699 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.45□□□□□ -1.7
SCN1BQ07699 RNU6-1279P-201ENST00000383917 103 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 MIR525-201ENST00000384978 85 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 RNA5SP372-201ENST00000390836 115 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SCN1BQ07699 AL031985.1-201ENST00000392713 418 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SCN1BQ07699 AL133325.1-201ENST00000421090 382 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 DEFB130D-201ENST00000426866 237 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SCN1BQ07699 OTX2P1-201ENST00000450956 354 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.45□□□□□ -1.7
SCN1BQ07699 AC233982.1-201ENST00000451247 436 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 AL606490.1-201ENST00000452266 765 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 AC104634.1-201ENST00000452720 462 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.45□□□□□ -1.7
SCN1BQ07699 AL645937.3-201ENST00000453647 936 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 AL035090.1-201ENST00000454835 332 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.45□□□□□ -1.7
SCN1BQ07699 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SCN1BQ07699 RPL35AP19-201ENST00000469425 329 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.45□□□□□ -1.7
SCN1BQ07699 RPS4XP6-201ENST00000477670 797 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 AC015724.1-201ENST00000478577 156 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.45□□□□□ -1.7
SCN1BQ07699 HMGB1P21-201ENST00000502313 581 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 AC106806.2-201ENST00000509365 500 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 MTATP6P1-201ENST00000514057 681 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 AC006427.1-201ENST00000514359 712 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 RNA5SP360-201ENST00000516555 118 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
SCN1BQ07699 PTP4A1P6-201ENST00000531034 478 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.45□□□□□ -1.7
SCN1BQ07699 AC092451.2-201ENST00000538746 658 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.45□□□□□ -1.7
SCN1BQ07699 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.45□□□□□ -1.7
SCN1BQ07699 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.45□□□□□ -1.7
SCN1BQ07699 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.45□□□□□ -1.7
SCN1BQ07699 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SCN1BQ07699 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.45□□□□□ -1.7
SCN1BQ07699 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.45□□□□□ -1.7
SCN1BQ07699 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.45□□□□□ -1.7
SCN1BQ07699 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.45□□□□□ -1.7
SCN1BQ07699 BNIP3P19-201ENST00000605397 577 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 AC009237.17-201ENST00000618111 748 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 MIR8080-201ENST00000622224 89 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 AL139811.1-201ENST00000424779 2299 ntBASIC4.45□□□□□ -1.7
SCN1BQ07699 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SCN1BQ07699 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.45□□□□□ -1.7
SCN1BQ07699 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SCN1BQ07699 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SCN1BQ07699 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SCN1BQ07699 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SCN1BQ07699 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.45□□□□□ -1.7
SCN1BQ07699 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SCN1BQ07699 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SCN1BQ07699 AC090229.1-201ENST00000590983 1609 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.44□□□□□ -1.7
SCN1BQ07699 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SCN1BQ07699 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.44□□□□□ -1.7
SCN1BQ07699 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.44□□□□□ -1.7
SCN1BQ07699 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SCN1BQ07699 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SCN1BQ07699 RNU6-354P-201ENST00000383862 107 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms