Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MIR8059-201ENST00000620427 81 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.13□□□□□ -1.59
GABPAQ06546 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
GABPAQ06546 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.13□□□□□ -1.59
GABPAQ06546 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GABPAQ06546 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GABPAQ06546 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.12□□□□□ -1.59
GABPAQ06546 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GABPAQ06546 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GABPAQ06546 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GABPAQ06546 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
GABPAQ06546 RN7SKP227-201ENST00000364445 330 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 AL607077.1-201ENST00000401718 499 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 RPS27AP11-201ENST00000402798 447 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.12□□□□□ -1.59
GABPAQ06546 RN7SKP235-201ENST00000410662 305 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 RN7SKP167-201ENST00000411047 285 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 AC002524.1-201ENST00000411687 547 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 RPS20P14-201ENST00000412545 360 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 COX6CP15-201ENST00000426313 211 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 MTCO1P51-201ENST00000427672 1060 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 AL512326.1-201ENST00000443050 721 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.12□□□□□ -1.59
GABPAQ06546 RPL35AP15-201ENST00000468042 339 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.12□□□□□ -1.59
GABPAQ06546 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.12□□□□□ -1.59
GABPAQ06546 AC138938.1-201ENST00000515431 782 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 FTH1P11-201ENST00000517577 551 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.12□□□□□ -1.59
GABPAQ06546 MIR4472-2-201ENST00000582069 67 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.12□□□□□ -1.59
GABPAQ06546 AC006116.5-201ENST00000591936 559 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 AL591034.3-201ENST00000605511 685 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.12□□□□□ -1.59
GABPAQ06546 FAM27D1-201ENST00000612308 341 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.12□□□□□ -1.59
GABPAQ06546 TMEM30CP-203ENST00000637814 1035 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 FP325313.1-201ENST00000638228 703 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.12□□□□□ -1.59
GABPAQ06546 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GABPAQ06546 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
GABPAQ06546 AC005261.4-201ENST00000600047 1385 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
GABPAQ06546 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.12□□□□□ -1.59
GABPAQ06546 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.12□□□□□ -1.59
GABPAQ06546 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.12□□□□□ -1.59
GABPAQ06546 AC093849.1-201ENST00000563631 2209 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GABPAQ06546 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
GABPAQ06546 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
GABPAQ06546 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
GABPAQ06546 MTND5P23-201ENST00000430812 1655 ntBASIC5.12□□□□□ -1.59
GABPAQ06546 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GABPAQ06546 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GABPAQ06546 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
GABPAQ06546 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.11□□□□□ -1.59
GABPAQ06546 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
GABPAQ06546 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
GABPAQ06546 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
GABPAQ06546 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
GABPAQ06546 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
GABPAQ06546 RNU1-14P-201ENST00000362759 152 ntBASIC5.11□□□□□ -1.59
GABPAQ06546 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
GABPAQ06546 AL672167.2-201ENST00000377164 879 ntBASIC5.11□□□□□ -1.59
GABPAQ06546 MIR1193-201ENST00000408109 78 ntBASIC5.11□□□□□ -1.59
GABPAQ06546 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.11□□□□□ -1.59
GABPAQ06546 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.11□□□□□ -1.59
GABPAQ06546 AL358176.3-201ENST00000420757 454 ntBASIC5.11□□□□□ -1.59
GABPAQ06546 AL392003.1-201ENST00000434394 243 ntBASIC5.11□□□□□ -1.59
GABPAQ06546 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.11□□□□□ -1.59
GABPAQ06546 AC239798.3-201ENST00000454459 408 ntBASIC5.11□□□□□ -1.59
GABPAQ06546 ATP5G1P3-201ENST00000463301 410 ntBASIC5.11□□□□□ -1.59
GABPAQ06546 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.11□□□□□ -1.59
GABPAQ06546 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.11□□□□□ -1.59
GABPAQ06546 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.11□□□□□ -1.59
GABPAQ06546 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.11□□□□□ -1.59
GABPAQ06546 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.11□□□□□ -1.59
GABPAQ06546 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.11□□□□□ -1.59
GABPAQ06546 SNORA31.9-201ENST00000516429 84 ntBASIC5.11□□□□□ -1.59
GABPAQ06546 SNORA70.17-201ENST00000516449 133 ntBASIC5.11□□□□□ -1.59
GABPAQ06546 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.11□□□□□ -1.59
GABPAQ06546 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.11□□□□□ -1.59
GABPAQ06546 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.11□□□□□ -1.59
GABPAQ06546 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
GABPAQ06546 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.11□□□□□ -1.59
GABPAQ06546 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.11□□□□□ -1.59
GABPAQ06546 AL159169.2-201ENST00000610061 1269 ntBASIC5.11□□□□□ -1.59
GABPAQ06546 AC007546.2-201ENST00000623996 360 ntBASIC5.11□□□□□ -1.59
GABPAQ06546 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.11□□□□□ -1.59
GABPAQ06546 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.11□□□□□ -1.59
GABPAQ06546 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
GABPAQ06546 AC091046.3-201ENST00000631455 1574 ntBASIC5.11□□□□□ -1.59
GABPAQ06546 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.11□□□□□ -1.59
GABPAQ06546 AL672167.1-205ENST00000641112 3080 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 MAPK10-286ENST00000641208 8747 ntBASIC5.1□□□□□ -1.59
GABPAQ06546 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GABPAQ06546 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GABPAQ06546 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
GABPAQ06546 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
GABPAQ06546 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms