Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
CX3CL1P78423 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CX3CL1P78423 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CX3CL1P78423 AL034370.1-201ENST00000397254 1590 ntBASIC4.19□□□□□ -1.74
CX3CL1P78423 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
CX3CL1P78423 AC022031.1-201ENST00000585985 2593 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CL1P78423 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CL1P78423 AL450345.1-202ENST00000605741 3881 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CL1P78423 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.18□□□□□ -1.74
CX3CL1P78423 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CL1P78423 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CL1P78423 AL672167.1-204ENST00000641875 3017 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 AC023421.1-201ENST00000590535 1785 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
CX3CL1P78423 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CX3CL1P78423 SCARNA15-201ENST00000607520 4325 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.18□□□□□ -1.74
CX3CL1P78423 AC005294.1-201ENST00000355509 281 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CL1P78423 RNU6-906P-201ENST00000384700 70 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
CX3CL1P78423 AL021331.1-201ENST00000402817 582 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.18□□□□□ -1.74
CX3CL1P78423 RNU4-22P-201ENST00000411058 166 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 AL592310.1-201ENST00000414330 671 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.18□□□□□ -1.74
CX3CL1P78423 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.18□□□□□ -1.74
CX3CL1P78423 CLUHP1-201ENST00000435012 1190 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 EIF2S2P2-201ENST00000447161 982 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 NOP56P2-201ENST00000447491 769 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.18□□□□□ -1.74
CX3CL1P78423 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.18□□□□□ -1.74
CX3CL1P78423 NAP1L1P3-201ENST00000462291 880 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.18□□□□□ -1.74
CX3CL1P78423 AC006511.1-201ENST00000470614 315 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 RPL7P6-201ENST00000480903 738 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 RN7SL346P-201ENST00000491561 294 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 RPL15P21-201ENST00000495592 567 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.18□□□□□ -1.74
CX3CL1P78423 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.18□□□□□ -1.74
CX3CL1P78423 RNA5SP228-201ENST00000516232 133 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.18□□□□□ -1.74
CX3CL1P78423 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.18□□□□□ -1.74
CX3CL1P78423 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.18□□□□□ -1.74
CX3CL1P78423 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.18□□□□□ -1.74
CX3CL1P78423 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.18□□□□□ -1.74
CX3CL1P78423 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.18□□□□□ -1.74
CX3CL1P78423 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.18□□□□□ -1.74
CX3CL1P78423 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.18□□□□□ -1.74
CX3CL1P78423 BNIP3P1-201ENST00000547295 580 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.18□□□□□ -1.74
CX3CL1P78423 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.18□□□□□ -1.74
CX3CL1P78423 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.18□□□□□ -1.74
CX3CL1P78423 AC018552.3-201ENST00000567416 561 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CL1P78423 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.18□□□□□ -1.74
CX3CL1P78423 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.18□□□□□ -1.74
CX3CL1P78423 PCNAP1-202ENST00000595299 752 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 AC069307.1-201ENST00000602820 447 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 AP000238.1-201ENST00000608759 426 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 AC009237.15-201ENST00000610252 501 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 MIR6768-201ENST00000610734 72 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 AC109309.2-201ENST00000612597 332 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 AC116447.1-201ENST00000613153 453 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 AL353726.1-201ENST00000614041 1000 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.18□□□□□ -1.74
CX3CL1P78423 AC006963.1-201ENST00000624003 1052 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.18□□□□□ -1.74
CX3CL1P78423 CYP4F35P-202ENST00000636121 390 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.18□□□□□ -1.74
CX3CL1P78423 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.18□□□□□ -1.74
CX3CL1P78423 ASNSP1-204ENST00000641977 1664 ntBASIC4.18□□□□□ -1.74
CX3CL1P78423 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CX3CL1P78423 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.18□□□□□ -1.74
CX3CL1P78423 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.18□□□□□ -1.74
CX3CL1P78423 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CX3CL1P78423 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.17□□□□□ -1.74
CX3CL1P78423 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.17□□□□□ -1.74
CX3CL1P78423 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CX3CL1P78423 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CX3CL1P78423 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.17□□□□□ -1.74
CX3CL1P78423 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CX3CL1P78423 AC134882.1-201ENST00000603738 1676 ntBASIC4.17□□□□□ -1.74
CX3CL1P78423 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.17□□□□□ -1.74
CX3CL1P78423 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CX3CL1P78423 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CX3CL1P78423 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CX3CL1P78423 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.17□□□□□ -1.74
CX3CL1P78423 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CX3CL1P78423 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CX3CL1P78423 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CX3CL1P78423 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.17□□□□□ -1.74
CX3CL1P78423 OR1L1-202ENST00000373686 1083 ntBASIC4.17□□□□□ -1.74
CX3CL1P78423 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.17□□□□□ -1.74
CX3CL1P78423 UBBP2-201ENST00000376781 231 ntBASIC4.17□□□□□ -1.74
CX3CL1P78423 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
CX3CL1P78423 Y_RNA.472-201ENST00000384322 102 ntBASIC4.17□□□□□ -1.74
CX3CL1P78423 SNORD116-12-201ENST00000384468 92 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms