Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RAB9AP5-201ENST00000437794 597 ntBASIC4.8□□□□□ -1.64
TPM4P67936 RAB9AP2-201ENST00000443911 597 ntBASIC4.8□□□□□ -1.64
TPM4P67936 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.8□□□□□ -1.64
TPM4P67936 AC099063.2-201ENST00000446360 662 ntBASIC4.8□□□□□ -1.64
TPM4P67936 AL162591.2-201ENST00000449634 317 ntBASIC4.8□□□□□ -1.64
TPM4P67936 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.8□□□□□ -1.64
TPM4P67936 RPL7P22-201ENST00000466005 733 ntBASIC4.8□□□□□ -1.64
TPM4P67936 RPL35AP15-201ENST00000468042 339 ntBASIC4.8□□□□□ -1.64
TPM4P67936 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.8□□□□□ -1.64
TPM4P67936 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.8□□□□□ -1.64
TPM4P67936 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.8□□□□□ -1.64
TPM4P67936 OR5AZ1P-201ENST00000527448 943 ntBASIC4.8□□□□□ -1.64
TPM4P67936 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.8□□□□□ -1.64
TPM4P67936 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.8□□□□□ -1.64
TPM4P67936 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.8□□□□□ -1.64
TPM4P67936 AC016180.1-201ENST00000567945 403 ntBASIC4.8□□□□□ -1.64
TPM4P67936 HMGB1P50-201ENST00000605814 607 ntBASIC4.8□□□□□ -1.64
TPM4P67936 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.8□□□□□ -1.64
TPM4P67936 AC096586.2-201ENST00000610260 441 ntBASIC4.8□□□□□ -1.64
TPM4P67936 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TPM4P67936 MIR6891-201ENST00000618788 93 ntBASIC4.8□□□□□ -1.64
TPM4P67936 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.8□□□□□ -1.64
TPM4P67936 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TPM4P67936 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TPM4P67936 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TPM4P67936 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.79□□□□□ -1.64
TPM4P67936 AL627171.1-201ENST00000618845 1308 ntBASIC4.79□□□□□ -1.64
TPM4P67936 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.79□□□□□ -1.64
TPM4P67936 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TPM4P67936 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TPM4P67936 RNA5SP175-201ENST00000364275 119 ntBASIC4.79□□□□□ -1.64
TPM4P67936 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TPM4P67936 OR13C3-201ENST00000374781 1108 ntBASIC4.79□□□□□ -1.64
TPM4P67936 MIR1179-201ENST00000408703 91 ntBASIC4.79□□□□□ -1.64
TPM4P67936 RNA5SP306-201ENST00000411087 107 ntBASIC4.79□□□□□ -1.64
TPM4P67936 AC079355.1-201ENST00000421770 223 ntBASIC4.79□□□□□ -1.64
TPM4P67936 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.79□□□□□ -1.64
TPM4P67936 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.79□□□□□ -1.64
TPM4P67936 AL035551.1-201ENST00000446931 348 ntBASIC4.79□□□□□ -1.64
TPM4P67936 RAD23BP3-201ENST00000454157 1152 ntBASIC4.79□□□□□ -1.64
TPM4P67936 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.79□□□□□ -1.64
TPM4P67936 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.79□□□□□ -1.64
TPM4P67936 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.79□□□□□ -1.64
TPM4P67936 AC025554.1-201ENST00000505641 188 ntBASIC4.79□□□□□ -1.64
TPM4P67936 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.79□□□□□ -1.64
TPM4P67936 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.79□□□□□ -1.64
TPM4P67936 PGBD4P4-201ENST00000509673 613 ntBASIC4.79□□□□□ -1.64
TPM4P67936 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.79□□□□□ -1.64
TPM4P67936 AL360157.1-201ENST00000565962 87 ntBASIC4.79□□□□□ -1.64
TPM4P67936 AC091042.1-201ENST00000579213 173 ntBASIC4.79□□□□□ -1.64
TPM4P67936 AC090312.1-201ENST00000580637 348 ntBASIC4.79□□□□□ -1.64
TPM4P67936 AL139286.1-201ENST00000604465 483 ntBASIC4.79□□□□□ -1.64
TPM4P67936 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.79□□□□□ -1.64
TPM4P67936 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TPM4P67936 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.79□□□□□ -1.64
TPM4P67936 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TPM4P67936 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TPM4P67936 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TPM4P67936 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TPM4P67936 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TPM4P67936 C4BPAP1-201ENST00000415474 1893 ntBASIC4.78□□□□□ -1.64
TPM4P67936 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TPM4P67936 SNORA51.8-201ENST00000384234 132 ntBASIC4.78□□□□□ -1.64
TPM4P67936 SNRPFP1-201ENST00000414761 252 ntBASIC4.78□□□□□ -1.64
TPM4P67936 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.78□□□□□ -1.64
TPM4P67936 AC091685.2-201ENST00000454924 864 ntBASIC4.78□□□□□ -1.64
TPM4P67936 APOOP2-201ENST00000461561 539 ntBASIC4.78□□□□□ -1.64
TPM4P67936 AC008953.1-201ENST00000497334 318 ntBASIC4.78□□□□□ -1.64
TPM4P67936 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.78□□□□□ -1.64
TPM4P67936 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.78□□□□□ -1.64
TPM4P67936 OR5BC1P-201ENST00000529327 739 ntBASIC4.78□□□□□ -1.64
TPM4P67936 AC006064.5-201ENST00000541782 248 ntBASIC4.78□□□□□ -1.64
TPM4P67936 PDCD5P1-201ENST00000543528 309 ntBASIC4.78□□□□□ -1.64
TPM4P67936 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.78□□□□□ -1.64
TPM4P67936 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.78□□□□□ -1.64
TPM4P67936 AL021997.2-201ENST00000615674 271 ntBASIC4.78□□□□□ -1.64
TPM4P67936 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TPM4P67936 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
TPM4P67936 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.78□□□□□ -1.64
TPM4P67936 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TPM4P67936 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TPM4P67936 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TPM4P67936 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
TPM4P67936 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.77□□□□□ -1.65
TPM4P67936 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TPM4P67936 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
TPM4P67936 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.77□□□□□ -1.65
TPM4P67936 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TPM4P67936 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
TPM4P67936 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.77□□□□□ -1.65
TPM4P67936 RNA5SP397-201ENST00000391323 118 ntBASIC4.77□□□□□ -1.65
TPM4P67936 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TPM4P67936 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.77□□□□□ -1.65
TPM4P67936 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.77□□□□□ -1.65
TPM4P67936 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TPM4P67936 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TPM4P67936 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.77□□□□□ -1.65
TPM4P67936 MTCO1P51-201ENST00000427672 1060 ntBASIC4.77□□□□□ -1.65
TPM4P67936 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.77□□□□□ -1.65
TPM4P67936 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms