Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RPL39P62891 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC2.86□□□□□ -1.95
RPL39P62891 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
RPL39P62891 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
RPL39P62891 SNORA70F-201ENST00000384142 135 ntBASIC2.86□□□□□ -1.95
RPL39P62891 RNU4-34P-201ENST00000410431 124 ntBASIC2.86□□□□□ -1.95
RPL39P62891 RN7SKP235-201ENST00000410662 305 ntBASIC2.86□□□□□ -1.95
RPL39P62891 NRBF2P2-201ENST00000413087 861 ntBASIC2.86□□□□□ -1.95
RPL39P62891 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RPL39P62891 AC104837.2-201ENST00000427236 424 ntBASIC2.86□□□□□ -1.95
RPL39P62891 RPL7P4-203ENST00000430239 730 ntBASIC2.86□□□□□ -1.95
RPL39P62891 AC011998.1-201ENST00000433403 117 ntBASIC2.86□□□□□ -1.95
RPL39P62891 ATP5HP2-201ENST00000433885 485 ntBASIC2.86□□□□□ -1.95
RPL39P62891 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC2.86□□□□□ -1.95
RPL39P62891 ARL2BPP10-201ENST00000446487 531 ntBASIC2.86□□□□□ -1.95
RPL39P62891 AL500522.2-201ENST00000448562 343 ntBASIC2.86□□□□□ -1.95
RPL39P62891 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC2.86□□□□□ -1.95
RPL39P62891 AC018638.3-201ENST00000461273 132 ntBASIC2.86□□□□□ -1.95
RPL39P62891 RPS3AP41-201ENST00000462701 778 ntBASIC2.86□□□□□ -1.95
RPL39P62891 AC010326.1-201ENST00000462726 602 ntBASIC2.86□□□□□ -1.95
RPL39P62891 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC2.86□□□□□ -1.95
RPL39P62891 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RPL39P62891 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
RPL39P62891 AC093824.1-201ENST00000508796 343 ntBASIC2.86□□□□□ -1.95
RPL39P62891 KRT19P6-201ENST00000510983 209 ntBASIC2.86□□□□□ -1.95
RPL39P62891 RNA5SP519-201ENST00000516480 119 ntBASIC2.86□□□□□ -1.95
RPL39P62891 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
RPL39P62891 AC141257.3-201ENST00000572906 215 ntBASIC2.86□□□□□ -1.95
RPL39P62891 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC2.86□□□□□ -1.95
RPL39P62891 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC2.86□□□□□ -1.95
RPL39P62891 AC115286.1-201ENST00000604298 434 ntBASIC2.86□□□□□ -1.95
RPL39P62891 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC2.86□□□□□ -1.95
RPL39P62891 AC005084.1-201ENST00000605160 304 ntBASIC2.86□□□□□ -1.95
RPL39P62891 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC2.86□□□□□ -1.95
RPL39P62891 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC2.86□□□□□ -1.95
RPL39P62891 AC012409.3-201ENST00000611343 981 ntBASIC2.86□□□□□ -1.95
RPL39P62891 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC2.86□□□□□ -1.95
RPL39P62891 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC2.86□□□□□ -1.95
RPL39P62891 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RPL39P62891 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RPL39P62891 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC2.86□□□□□ -1.95
RPL39P62891 AC090017.1-201ENST00000548612 1779 ntBASIC2.86□□□□□ -1.95
RPL39P62891 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC2.86□□□□□ -1.95
RPL39P62891 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RPL39P62891 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RPL39P62891 AC109780.1-201ENST00000451768 1344 ntBASIC2.86□□□□□ -1.95
RPL39P62891 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
RPL39P62891 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
RPL39P62891 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RPL39P62891 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RPL39P62891 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RPL39P62891 AC010300.1-201ENST00000600671 5134 ntBASIC2.85□□□□□ -1.95
RPL39P62891 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RPL39P62891 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RPL39P62891 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC2.85□□□□□ -1.95
RPL39P62891 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
RPL39P62891 MFSD8-216ENST00000641147 4009 ntBASIC2.85□□□□□ -1.95
RPL39P62891 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RPL39P62891 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RPL39P62891 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RPL39P62891 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RPL39P62891 RNU1-14P-201ENST00000362759 152 ntBASIC2.85□□□□□ -1.95
RPL39P62891 RNU1-18P-201ENST00000363062 164 ntBASIC2.85□□□□□ -1.95
RPL39P62891 AL109941.1-201ENST00000401925 229 ntBASIC2.85□□□□□ -1.95
RPL39P62891 RPL23AP48-201ENST00000406913 488 ntBASIC2.85□□□□□ -1.95
RPL39P62891 MRM2-202ENST00000407040 582 ntTSL 3 BASIC2.85□□□□□ -1.95
RPL39P62891 RPL6P29-201ENST00000414863 865 ntBASIC2.85□□□□□ -1.95
RPL39P62891 IFNNP1-201ENST00000429219 553 ntBASIC2.85□□□□□ -1.95
RPL39P62891 FTLP19-201ENST00000433300 394 ntBASIC2.85□□□□□ -1.95
RPL39P62891 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC2.85□□□□□ -1.95
RPL39P62891 PHBP16-201ENST00000446318 950 ntBASIC2.85□□□□□ -1.95
RPL39P62891 AC092324.1-201ENST00000468671 324 ntBASIC2.85□□□□□ -1.95
RPL39P62891 RN7SL354P-201ENST00000469282 294 ntBASIC2.85□□□□□ -1.95
RPL39P62891 RPS27AP16-201ENST00000492222 470 ntBASIC2.85□□□□□ -1.95
RPL39P62891 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC2.85□□□□□ -1.95
RPL39P62891 RPL29P14-201ENST00000495837 428 ntBASIC2.85□□□□□ -1.95
RPL39P62891 AC092851.1-201ENST00000535964 478 ntBASIC2.85□□□□□ -1.95
RPL39P62891 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC2.85□□□□□ -1.95
RPL39P62891 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RPL39P62891 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RPL39P62891 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC2.85□□□□□ -1.95
RPL39P62891 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC2.85□□□□□ -1.95
RPL39P62891 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC2.85□□□□□ -1.95
RPL39P62891 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC2.85□□□□□ -1.95
RPL39P62891 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC2.85□□□□□ -1.95
RPL39P62891 AC084783.1-201ENST00000565846 910 ntBASIC2.85□□□□□ -1.95
RPL39P62891 AC022655.2-201ENST00000577280 318 ntBASIC2.85□□□□□ -1.95
RPL39P62891 RN7SL690P-201ENST00000582087 240 ntBASIC2.85□□□□□ -1.95
RPL39P62891 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC2.85□□□□□ -1.95
RPL39P62891 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RPL39P62891 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RPL39P62891 ST7-221ENST00000465133 2155 ntTSL 5 BASIC2.85□□□□□ -1.95
RPL39P62891 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
RPL39P62891 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
RPL39P62891 UBE3AP2-201ENST00000429033 2259 ntBASIC2.85□□□□□ -1.95
RPL39P62891 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RPL39P62891 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC2.85□□□□□ -1.95
RPL39P62891 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
RPL39P62891 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC2.85□□□□□ -1.95
RPL39P62891 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms