Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 OR5AN2P-201ENST00000534535 896 ntBASIC4.28□□□□□ -1.72
RPS4XP62701 AP006289.1-201ENST00000538089 277 ntBASIC4.28□□□□□ -1.72
RPS4XP62701 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.28□□□□□ -1.72
RPS4XP62701 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.28□□□□□ -1.72
RPS4XP62701 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.28□□□□□ -1.72
RPS4XP62701 AC068714.1-201ENST00000559623 800 ntBASIC4.28□□□□□ -1.72
RPS4XP62701 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.28□□□□□ -1.72
RPS4XP62701 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.28□□□□□ -1.72
RPS4XP62701 AC015912.2-201ENST00000571053 181 ntBASIC4.28□□□□□ -1.72
RPS4XP62701 AC022884.3-201ENST00000579571 248 ntBASIC4.28□□□□□ -1.72
RPS4XP62701 AL391358.1-201ENST00000605342 190 ntBASIC4.28□□□□□ -1.72
RPS4XP62701 AP001033.2-201ENST00000609701 1003 ntBASIC4.28□□□□□ -1.72
RPS4XP62701 MIR378J-201ENST00000611988 109 ntBASIC4.28□□□□□ -1.72
RPS4XP62701 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RPS4XP62701 AC011815.3-201ENST00000624194 473 ntBASIC4.28□□□□□ -1.72
RPS4XP62701 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RPS4XP62701 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RPS4XP62701 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.28□□□□□ -1.72
RPS4XP62701 AC107027.3-201ENST00000565095 3473 ntBASIC4.28□□□□□ -1.72
RPS4XP62701 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RPS4XP62701 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
RPS4XP62701 AP000542.2-201ENST00000623199 6179 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
RPS4XP62701 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPS4XP62701 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RPS4XP62701 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPS4XP62701 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.27□□□□□ -1.73
RPS4XP62701 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.27□□□□□ -1.73
RPS4XP62701 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPS4XP62701 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPS4XP62701 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RPS4XP62701 AL031119.1-201ENST00000404707 1879 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RPS4XP62701 MIR298-201ENST00000401212 88 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 AL080315.1-201ENST00000406055 466 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 RNU2-72P-201ENST00000411175 163 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.27□□□□□ -1.73
RPS4XP62701 AC009302.1-201ENST00000417147 390 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.27□□□□□ -1.73
RPS4XP62701 AC048351.1-201ENST00000420064 602 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 AC099336.2-201ENST00000422457 254 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 Z74021.1-201ENST00000423610 407 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 FABP7P1-201ENST00000424004 391 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 AL513533.1-201ENST00000453728 415 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.27□□□□□ -1.73
RPS4XP62701 AC099560.2-201ENST00000457554 255 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 METTL15P1-201ENST00000481421 1045 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 AC025164.1-201ENST00000496249 478 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.27□□□□□ -1.73
RPS4XP62701 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.27□□□□□ -1.73
RPS4XP62701 RN7SKP141-201ENST00000516167 338 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 RNA5SP464-201ENST00000516251 108 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 RNU1-6P-201ENST00000516290 144 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.27□□□□□ -1.73
RPS4XP62701 MORF4L1P3-201ENST00000525966 950 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.27□□□□□ -1.73
RPS4XP62701 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.27□□□□□ -1.73
RPS4XP62701 NPM1P47-201ENST00000560843 856 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.27□□□□□ -1.73
RPS4XP62701 MIR4697-201ENST00000582977 78 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.27□□□□□ -1.73
RPS4XP62701 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.27□□□□□ -1.73
RPS4XP62701 ZNF92P2-201ENST00000600543 1059 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.27□□□□□ -1.73
RPS4XP62701 MIR6780A-201ENST00000615089 68 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 uc_338.9-201ENST00000617424 182 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.27□□□□□ -1.73
RPS4XP62701 AL731566.2-201ENST00000618971 317 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.27□□□□□ -1.73
RPS4XP62701 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.27□□□□□ -1.73
RPS4XP62701 FRG1DP-201ENST00000635586 771 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RPS4XP62701 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPS4XP62701 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.27□□□□□ -1.73
RPS4XP62701 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.27□□□□□ -1.73
RPS4XP62701 SAMMSON-226ENST00000642089 1582 ntBASIC4.27□□□□□ -1.73
RPS4XP62701 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
RPS4XP62701 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RPS4XP62701 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.26□□□□□ -1.73
RPS4XP62701 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
RPS4XP62701 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.26□□□□□ -1.73
RPS4XP62701 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.26□□□□□ -1.73
RPS4XP62701 AP001002.1-201ENST00000625148 1513 ntBASIC4.26□□□□□ -1.73
RPS4XP62701 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RPS4XP62701 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RPS4XP62701 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RPS4XP62701 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.26□□□□□ -1.73
RPS4XP62701 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RPS4XP62701 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RPS4XP62701 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RPS4XP62701 NCLP2-201ENST00000416078 1462 ntBASIC4.26□□□□□ -1.73
RPS4XP62701 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RPS4XP62701 AC079741.1-201ENST00000321498 212 ntBASIC4.26□□□□□ -1.73
RPS4XP62701 RNU6-252P-201ENST00000363232 107 ntBASIC4.26□□□□□ -1.73
RPS4XP62701 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RPS4XP62701 RNU6-452P-201ENST00000384406 107 ntBASIC4.26□□□□□ -1.73
RPS4XP62701 HMGB1P10-201ENST00000395823 563 ntBASIC4.26□□□□□ -1.73
RPS4XP62701 RNU2-17P-201ENST00000410290 190 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms