Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA1P56159 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
GFRA1P56159 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.61□□□□□ -1.51
GFRA1P56159 AC245052.5-201ENST00000416320 649 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 AC233728.2-201ENST00000425348 757 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.61□□□□□ -1.51
GFRA1P56159 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.61□□□□□ -1.51
GFRA1P56159 OR3D1P-201ENST00000438288 955 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 AL512605.1-202ENST00000441919 381 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA1P56159 VN1R34P-201ENST00000447387 883 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
GFRA1P56159 AL354710.1-201ENST00000453641 246 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 AC009963.3-201ENST00000458090 486 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.61□□□□□ -1.51
GFRA1P56159 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.61□□□□□ -1.51
GFRA1P56159 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.61□□□□□ -1.51
GFRA1P56159 AC091133.4-201ENST00000511142 308 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 KCTD9P2-201ENST00000512203 1013 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.61□□□□□ -1.51
GFRA1P56159 AC022878.1-201ENST00000530684 149 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.61□□□□□ -1.51
GFRA1P56159 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.61□□□□□ -1.51
GFRA1P56159 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.61□□□□□ -1.51
GFRA1P56159 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.61□□□□□ -1.51
GFRA1P56159 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.61□□□□□ -1.51
GFRA1P56159 AL389895.1-201ENST00000554127 252 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 AP005205.1-201ENST00000563503 508 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 DPPA2P4-201ENST00000563717 878 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA1P56159 UBE2FP2-201ENST00000566646 462 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.61□□□□□ -1.51
GFRA1P56159 MIR3913-1-201ENST00000577744 102 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 MIR4637-201ENST00000582405 84 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 AC027229.1-201ENST00000583887 253 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.61□□□□□ -1.51
GFRA1P56159 AC233280.2-201ENST00000603917 1070 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 AC011451.2-201ENST00000604303 598 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
GFRA1P56159 AC069234.5-201ENST00000611056 416 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 AC015712.7-201ENST00000615211 635 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 AC007014.2-201ENST00000615581 479 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.61□□□□□ -1.51
GFRA1P56159 AC072046.2-201ENST00000618366 268 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 TCL6_3.1-201ENST00000619064 137 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 FAM27E2-201ENST00000619668 403 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
GFRA1P56159 AC005225.5-201ENST00000623547 2225 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 OR2L1P-202ENST00000641567 1023 ntBASIC5.61□□□□□ -1.51
GFRA1P56159 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA1P56159 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.61□□□□□ -1.51
GFRA1P56159 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA1P56159 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.61□□□□□ -1.51
GFRA1P56159 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
GFRA1P56159 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.61□□□□□ -1.51
GFRA1P56159 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
GFRA1P56159 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.61□□□□□ -1.51
GFRA1P56159 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA1P56159 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.6□□□□□ -1.51
GFRA1P56159 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA1P56159 USP9YP4-201ENST00000424401 1745 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
GFRA1P56159 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA1P56159 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.6□□□□□ -1.51
GFRA1P56159 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA1P56159 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA1P56159 HDAC1P2-201ENST00000453661 1398 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA1P56159 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.6□□□□□ -1.51
GFRA1P56159 MIR433-201ENST00000384837 93 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 RPS3AP24-201ENST00000407896 734 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA1P56159 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.6□□□□□ -1.51
GFRA1P56159 AC130360.1-201ENST00000425489 1117 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA1P56159 AC109583.1-201ENST00000432156 268 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.6□□□□□ -1.51
GFRA1P56159 PCNPP2-201ENST00000441651 455 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 GDI2P2-201ENST00000445131 608 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA1P56159 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 AL590365.1-201ENST00000450788 243 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC5.6□□□□□ -1.51
GFRA1P56159 PPIAP7-201ENST00000454070 489 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.6□□□□□ -1.51
GFRA1P56159 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.6□□□□□ -1.51
GFRA1P56159 KRT19P6-201ENST00000510983 209 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 RNA5SP434-201ENST00000516647 121 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 SNORA18.6-201ENST00000516792 115 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 Y_RNA.710-201ENST00000516975 110 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 RN7SKP35-201ENST00000517210 151 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA1P56159 AC130365.2-201ENST00000525882 1201 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 AP000620.1-201ENST00000527147 504 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 AP000790.1-201ENST00000528891 737 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 AC118273.2-201ENST00000532092 465 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 RPA2P3-201ENST00000533268 770 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA1P56159 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms