Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AL445687.2-201ENST00000458156 728 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 NCOR1P1-202ENST00000486162 291 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC6.02□□□□□ -1.45
EPHB3P54753 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC6.02□□□□□ -1.45
EPHB3P54753 TCP11X3P-202ENST00000514289 1254 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 snoZ278.1-201ENST00000517059 112 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.02□□□□□ -1.45
EPHB3P54753 AC090424.1-201ENST00000535243 736 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC6.02□□□□□ -1.45
EPHB3P54753 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
EPHB3P54753 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC6.02□□□□□ -1.45
EPHB3P54753 AC009063.1-201ENST00000563342 702 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.02□□□□□ -1.45
EPHB3P54753 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.02□□□□□ -1.45
EPHB3P54753 AC015720.2-201ENST00000567709 334 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC6.02□□□□□ -1.45
EPHB3P54753 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC6.02□□□□□ -1.45
EPHB3P54753 AC013244.1-201ENST00000604279 193 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 AC064836.2-201ENST00000609491 462 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 AC006338.1-201ENST00000618453 749 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
EPHB3P54753 AL133370.2-201ENST00000619934 439 ntBASIC6.02□□□□□ -1.45
EPHB3P54753 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
EPHB3P54753 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.02□□□□□ -1.45
EPHB3P54753 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
EPHB3P54753 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
EPHB3P54753 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.02□□□□□ -1.45
EPHB3P54753 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
EPHB3P54753 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
EPHB3P54753 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
EPHB3P54753 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
EPHB3P54753 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
EPHB3P54753 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
EPHB3P54753 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
EPHB3P54753 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.02□□□□□ -1.45
EPHB3P54753 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
EPHB3P54753 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.01□□□□□ -1.45
EPHB3P54753 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
EPHB3P54753 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
EPHB3P54753 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
EPHB3P54753 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
EPHB3P54753 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.01□□□□□ -1.45
EPHB3P54753 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
EPHB3P54753 AC116158.1-201ENST00000560231 2129 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 AC112255.1-201ENST00000624070 2493 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
EPHB3P54753 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
EPHB3P54753 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.01□□□□□ -1.45
EPHB3P54753 AC008033.1-201ENST00000216407 1162 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
EPHB3P54753 RNU6-353P-201ENST00000364266 108 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 RNY3P10-201ENST00000384764 102 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 MIR1178-201ENST00000408396 91 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 RN7SKP59-201ENST00000410520 314 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.01□□□□□ -1.45
EPHB3P54753 PAICSP7-201ENST00000419829 962 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 OFD1P2Y-201ENST00000421895 1149 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 AL355433.1-201ENST00000422804 300 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 AL133173.1-201ENST00000423458 397 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.01□□□□□ -1.45
EPHB3P54753 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC6.01□□□□□ -1.45
EPHB3P54753 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.01□□□□□ -1.45
EPHB3P54753 AL390119.1-201ENST00000440329 312 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC6.01□□□□□ -1.45
EPHB3P54753 AL163193.1-201ENST00000444895 788 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
EPHB3P54753 RNA5SP269-201ENST00000459032 137 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 RPS23P2-201ENST00000463671 415 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 AC079080.1-201ENST00000479841 822 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 AC006539.1-201ENST00000481419 501 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC6.01□□□□□ -1.45
EPHB3P54753 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.01□□□□□ -1.45
EPHB3P54753 MTCO2P30-201ENST00000503662 364 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 MTND5P5-201ENST00000503764 376 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 AC008638.1-201ENST00000506035 866 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC6.01□□□□□ -1.45
EPHB3P54753 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC6.01□□□□□ -1.45
EPHB3P54753 AC105384.2-201ENST00000508433 640 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.01□□□□□ -1.45
EPHB3P54753 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
EPHB3P54753 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC6.01□□□□□ -1.45
EPHB3P54753 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6.01□□□□□ -1.45
EPHB3P54753 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.01□□□□□ -1.45
EPHB3P54753 SMARCE1P4-201ENST00000523647 241 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.01□□□□□ -1.45
EPHB3P54753 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.01□□□□□ -1.45
EPHB3P54753 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.01□□□□□ -1.45
EPHB3P54753 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.01□□□□□ -1.45
EPHB3P54753 AC068276.1-201ENST00000605793 379 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 AL589743.7-201ENST00000612637 233 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 Y_RNA.804-201ENST00000615262 101 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
EPHB3P54753 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
EPHB3P54753 AC022509.4-201ENST00000621404 572 ntBASIC6.01□□□□□ -1.45
EPHB3P54753 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.01□□□□□ -1.45
EPHB3P54753 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
EPHB3P54753 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.01□□□□□ -1.45
EPHB3P54753 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
EPHB3P54753 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms