Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.07□□□□□ -1.76
HCFC1P51610 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.07□□□□□ -1.76
HCFC1P51610 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.07□□□□□ -1.76
HCFC1P51610 MIMT1-201ENST00000597105 1050 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 AC090181.2-201ENST00000602975 672 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 AC015849.2-201ENST00000605738 409 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 AC110792.4-201ENST00000609843 298 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 AL133370.2-201ENST00000619934 439 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 AC097460.3-201ENST00000623099 442 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 AC004808.1-201ENST00000627671 721 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.07□□□□□ -1.76
HCFC1P51610 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HCFC1P51610 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HCFC1P51610 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.07□□□□□ -1.76
HCFC1P51610 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.07□□□□□ -1.76
HCFC1P51610 AC135352.1-201ENST00000506173 1418 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HCFC1P51610 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HCFC1P51610 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HCFC1P51610 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HCFC1P51610 CR382285.2-201ENST00000624662 1495 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HCFC1P51610 AC008033.1-201ENST00000216407 1162 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HCFC1P51610 RN7SKP227-201ENST00000364445 330 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HCFC1P51610 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
HCFC1P51610 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HCFC1P51610 AL035405.1-201ENST00000400795 710 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 VN1R37P-201ENST00000419096 748 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HCFC1P51610 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.07□□□□□ -1.76
HCFC1P51610 AC073464.3-201ENST00000422564 712 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.07□□□□□ -1.76
HCFC1P51610 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.07□□□□□ -1.76
HCFC1P51610 MTND6P32-201ENST00000457611 483 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 TPT1P1-201ENST00000458495 518 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.07□□□□□ -1.76
HCFC1P51610 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.07□□□□□ -1.76
HCFC1P51610 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.07□□□□□ -1.76
HCFC1P51610 MTCO2P9-201ENST00000503214 694 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.07□□□□□ -1.76
HCFC1P51610 AC010468.3-201ENST00000508225 458 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.07□□□□□ -1.76
HCFC1P51610 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.07□□□□□ -1.76
HCFC1P51610 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HCFC1P51610 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.07□□□□□ -1.76
HCFC1P51610 AC084824.1-201ENST00000550917 1005 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 AC023158.1-201ENST00000561632 1025 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.07□□□□□ -1.76
HCFC1P51610 AC023575.1-201ENST00000580510 358 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 AP005262.1-201ENST00000582646 997 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HCFC1P51610 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.07□□□□□ -1.76
HCFC1P51610 AC018645.2-201ENST00000609151 472 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 AC015922.4-201ENST00000612568 690 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 AC005156.1-201ENST00000613371 573 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HCFC1P51610 AL122125.1-201ENST00000616999 600 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 AC022106.2-201ENST00000620114 757 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 AL669942.2-201ENST00000620352 697 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 RPL23AP61-201ENST00000623642 466 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HCFC1P51610 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HCFC1P51610 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HCFC1P51610 AC100871.1-201ENST00000507871 1456 ntBASIC4.07□□□□□ -1.76
HCFC1P51610 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.07□□□□□ -1.76
HCFC1P51610 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HCFC1P51610 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HCFC1P51610 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HCFC1P51610 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HCFC1P51610 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HCFC1P51610 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
HCFC1P51610 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.06□□□□□ -1.76
HCFC1P51610 ZNF137P-201ENST00000456718 1920 ntBASIC4.06□□□□□ -1.76
HCFC1P51610 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
HCFC1P51610 RNU1-130P-201ENST00000363930 160 ntBASIC4.06□□□□□ -1.76
HCFC1P51610 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HCFC1P51610 MIR659-201ENST00000384963 97 ntBASIC4.06□□□□□ -1.76
HCFC1P51610 RPL23AP59-201ENST00000399415 461 ntBASIC4.06□□□□□ -1.76
HCFC1P51610 OR13Z1P-201ENST00000416141 834 ntBASIC4.06□□□□□ -1.76
HCFC1P51610 AP001324.1-201ENST00000428553 399 ntBASIC4.06□□□□□ -1.76
HCFC1P51610 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.06□□□□□ -1.76
HCFC1P51610 BUD31P2-201ENST00000449374 300 ntBASIC4.06□□□□□ -1.76
HCFC1P51610 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.06□□□□□ -1.76
HCFC1P51610 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.06□□□□□ -1.76
HCFC1P51610 AC093166.2-201ENST00000455969 1017 ntBASIC4.06□□□□□ -1.76
HCFC1P51610 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.06□□□□□ -1.76
HCFC1P51610 AC105137.1-201ENST00000484355 562 ntBASIC4.06□□□□□ -1.76
HCFC1P51610 MTCO1P35-201ENST00000515270 228 ntBASIC4.06□□□□□ -1.76
HCFC1P51610 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HCFC1P51610 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.06□□□□□ -1.76
HCFC1P51610 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.06□□□□□ -1.76
HCFC1P51610 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.06□□□□□ -1.76
HCFC1P51610 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.06□□□□□ -1.76
HCFC1P51610 AC108751.5-201ENST00000492880 1336 ntBASIC4.06□□□□□ -1.76
HCFC1P51610 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.06□□□□□ -1.76
HCFC1P51610 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HCFC1P51610 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms