Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 Z74696.2-201ENST00000436514 498 ntBASIC4.45□□□□□ -1.7
HTTP42858 RPL23AP37-201ENST00000479658 549 ntBASIC4.45□□□□□ -1.7
HTTP42858 AC020893.1-201ENST00000502452 580 ntBASIC4.45□□□□□ -1.7
HTTP42858 HIGD1AP18-201ENST00000520730 278 ntBASIC4.45□□□□□ -1.7
HTTP42858 DEFB109D-201ENST00000529497 240 ntBASIC4.45□□□□□ -1.7
HTTP42858 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC4.45□□□□□ -1.7
HTTP42858 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HTTP42858 MAPK10-303ENST00000641324 3959 ntBASIC4.45□□□□□ -1.7
HTTP42858 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HTTP42858 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HTTP42858 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HTTP42858 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HTTP42858 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HTTP42858 RNA5SP399-201ENST00000364003 117 ntBASIC4.45□□□□□ -1.7
HTTP42858 AL603766.1-201ENST00000407763 664 ntBASIC4.45□□□□□ -1.7
HTTP42858 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.45□□□□□ -1.7
HTTP42858 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.45□□□□□ -1.7
HTTP42858 FCF1P7-201ENST00000451185 558 ntBASIC4.45□□□□□ -1.7
HTTP42858 AC087369.1-201ENST00000520775 996 ntBASIC4.45□□□□□ -1.7
HTTP42858 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.45□□□□□ -1.7
HTTP42858 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.45□□□□□ -1.7
HTTP42858 AC091167.4-201ENST00000605079 184 ntBASIC4.45□□□□□ -1.7
HTTP42858 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HTTP42858 AL360270.2-201ENST00000562952 5985 ntBASIC4.45□□□□□ -1.7
HTTP42858 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HTTP42858 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HTTP42858 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.44□□□□□ -1.7
HTTP42858 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HTTP42858 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.44□□□□□ -1.7
HTTP42858 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HTTP42858 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.44□□□□□ -1.7
HTTP42858 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.44□□□□□ -1.7
HTTP42858 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HTTP42858 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.44□□□□□ -1.7
HTTP42858 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HTTP42858 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.44□□□□□ -1.7
HTTP42858 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HTTP42858 RPS29P4-201ENST00000414733 161 ntBASIC4.44□□□□□ -1.7
HTTP42858 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.44□□□□□ -1.7
HTTP42858 CYCSP24-201ENST00000445119 316 ntBASIC4.44□□□□□ -1.7
HTTP42858 AC025518.1-201ENST00000479856 347 ntBASIC4.44□□□□□ -1.7
HTTP42858 FTH1P9-201ENST00000513251 355 ntBASIC4.44□□□□□ -1.7
HTTP42858 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.44□□□□□ -1.7
HTTP42858 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HTTP42858 AC010733.2-201ENST00000589496 5702 ntBASIC4.44□□□□□ -1.7
HTTP42858 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.44□□□□□ -1.7
HTTP42858 AL442128.2-201ENST00000620246 1824 ntBASIC4.44□□□□□ -1.7
HTTP42858 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HTTP42858 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HTTP42858 U3.26-201ENST00000391236 204 ntBASIC4.43□□□□□ -1.7
HTTP42858 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.43□□□□□ -1.7
HTTP42858 AJ239321.1-201ENST00000424255 564 ntBASIC4.43□□□□□ -1.7
HTTP42858 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.43□□□□□ -1.7
HTTP42858 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.43□□□□□ -1.7
HTTP42858 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.43□□□□□ -1.7
HTTP42858 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.43□□□□□ -1.7
HTTP42858 MIR432-201ENST00000606207 94 ntBASIC4.43□□□□□ -1.7
HTTP42858 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.43□□□□□ -1.7
HTTP42858 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HTTP42858 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.43□□□□□ -1.7
HTTP42858 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HTTP42858 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HTTP42858 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HTTP42858 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HTTP42858 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HTTP42858 AL592291.1-201ENST00000403830 352 ntBASIC4.43□□□□□ -1.7
HTTP42858 MIR1911-201ENST00000410783 80 ntBASIC4.43□□□□□ -1.7
HTTP42858 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.43□□□□□ -1.7
HTTP42858 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.43□□□□□ -1.7
HTTP42858 RPL12P46-201ENST00000436610 195 ntBASIC4.43□□□□□ -1.7
HTTP42858 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.43□□□□□ -1.7
HTTP42858 AC119674.1-212ENST00000641155 993 ntBASIC4.43□□□□□ -1.7
HTTP42858 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
HTTP42858 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.43□□□□□ -1.7
HTTP42858 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HTTP42858 AC127537.2-201ENST00000439258 465 ntBASIC4.43□□□□□ -1.7
HTTP42858 RPL21P23-201ENST00000446654 460 ntBASIC4.43□□□□□ -1.7
HTTP42858 AL157385.1-201ENST00000446973 268 ntBASIC4.43□□□□□ -1.7
HTTP42858 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.43□□□□□ -1.7
HTTP42858 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.43□□□□□ -1.7
HTTP42858 AC092376.2-201ENST00000622621 4116 ntBASIC4.43□□□□□ -1.7
HTTP42858 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC4.43□□□□□ -1.7
HTTP42858 ZNF812P-201ENST00000457674 1694 ntBASIC4.43□□□□□ -1.7
HTTP42858 AC093591.2-201ENST00000565254 3843 ntBASIC4.43□□□□□ -1.7
HTTP42858 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HTTP42858 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HTTP42858 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
HTTP42858 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
HTTP42858 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HTTP42858 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HTTP42858 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC4.42□□□□□ -1.7
HTTP42858 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HTTP42858 AL512649.1-201ENST00000428997 581 ntBASIC4.42□□□□□ -1.7
HTTP42858 AC233982.1-201ENST00000451247 436 ntBASIC4.42□□□□□ -1.7
HTTP42858 AC073387.1-201ENST00000453261 709 ntBASIC4.42□□□□□ -1.7
HTTP42858 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
HTTP42858 AC009229.4-201ENST00000623854 1947 ntBASIC4.42□□□□□ -1.7
HTTP42858 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HTTP42858 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HTTP42858 OR56B2P-201ENST00000317102 954 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms