Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 NLRP4-201ENST00000301295 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 TOR1AIP1-208ENST00000528443 3685 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
HOXD11P31277 TDRD9-201ENST00000339063 3447 ntTSL 5 BASIC9.18□□□□□ -0.94
HOXD11P31277 INTS3-210ENST00000512605 3442 ntTSL 2 BASIC9.18□□□□□ -0.94
HOXD11P31277 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 LRRC37A3-211ENST00000584306 5665 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 PPP1R3B-201ENST00000310455 5548 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC9.18□□□□□ -0.94
HOXD11P31277 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC9.18□□□□□ -0.94
HOXD11P31277 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 AC008758.1-201ENST00000428311 4505 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
HOXD11P31277 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC9.17□□□□□ -0.94
HOXD11P31277 WASHC2A-204ENST00000399339 4323 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
HOXD11P31277 DDHD1-210ENST00000612692 12339 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
HOXD11P31277 ZNF702P-202ENST00000434269 1966 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 CD207-201ENST00000410009 1869 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
HOXD11P31277 ST5-237ENST00000530991 3396 ntTSL 2 BASIC9.17□□□□□ -0.94
HOXD11P31277 AC092724.1-201ENST00000624623 3397 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC9.17□□□□□ -0.94
HOXD11P31277 CCT5P1-201ENST00000502314 1618 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 STXBP5L-206ENST00000492541 3114 ntTSL 5 BASIC9.17□□□□□ -0.94
HOXD11P31277 ARHGAP42P5-201ENST00000548856 2936 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 PLA2G4A-201ENST00000367466 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
HOXD11P31277 GABRR1-207ENST00000621627 2857 ntTSL 5 BASIC9.17□□□□□ -0.94
HOXD11P31277 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC9.17□□□□□ -0.94
HOXD11P31277 AL096869.3-201ENST00000567837 2626 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 DCLRE1B-201ENST00000369563 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
HOXD11P31277 AC003958.2-202ENST00000432258 3890 ntTSL 2 BASIC9.17□□□□□ -0.94
HOXD11P31277 RPL10P16-201ENST00000325000 645 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 RNU6-19P-201ENST00000384718 107 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 RN7SKP216-201ENST00000411050 312 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 RNU6-592P-201ENST00000411333 103 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 PPP1R11P2-201ENST00000423543 382 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC9.17□□□□□ -0.94
HOXD11P31277 AL136529.1-201ENST00000430540 610 ntTSL 3 BASIC9.17□□□□□ -0.94
HOXD11P31277 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC9.17□□□□□ -0.94
HOXD11P31277 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC9.17□□□□□ -0.94
HOXD11P31277 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC9.17□□□□□ -0.94
HOXD11P31277 RN7SL815P-201ENST00000470970 290 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC9.17□□□□□ -0.94
HOXD11P31277 AC034105.2-201ENST00000561866 238 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 MIR5695-201ENST00000579717 85 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 MIR1273F-201ENST00000580581 99 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 RN7SL25P-201ENST00000583862 260 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC9.17□□□□□ -0.94
HOXD11P31277 AC006967.3-201ENST00000594086 1093 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 SUSD2P2-201ENST00000611186 758 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 AL161629.2-201ENST00000615347 275 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 AP001318.4-201ENST00000616637 121 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 GANC-206ENST00000566442 2512 ntTSL 2 BASIC9.17□□□□□ -0.94
HOXD11P31277 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
HOXD11P31277 CACNB2-204ENST00000377315 3461 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
HOXD11P31277 SELENOT-207ENST00000615547 3488 ntTSL 5 BASIC9.17□□□□□ -0.94
HOXD11P31277 ZMYND8-220ENST00000617418 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
HOXD11P31277 DDX46-202ENST00000452510 5689 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
HOXD11P31277 AC011453.1-201ENST00000597619 2239 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
HOXD11P31277 TAOK1-201ENST00000261716 12407 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
HOXD11P31277 KCNJ3-201ENST00000295101 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
HOXD11P31277 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
HOXD11P31277 RACGAP1P-201ENST00000550663 1879 ntBASIC9.17□□□□□ -0.94
HOXD11P31277 EFHC1-214ENST00000636107 3530 ntTSL 5 BASIC9.17□□□□□ -0.94
HOXD11P31277 ZNF155-201ENST00000270014 2596 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
HOXD11P31277 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC9.16□□□□□ -0.94
HOXD11P31277 ZNF556-201ENST00000307635 6574 ntAPPRIS P3 TSL 2 BASIC9.16□□□□□ -0.94
HOXD11P31277 SLC26A9-203ENST00000367135 4799 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
HOXD11P31277 CSF1R-201ENST00000286301 3989 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
HOXD11P31277 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
HOXD11P31277 MARK3-203ENST00000335102 2331 ntTSL 5 BASIC9.16□□□□□ -0.94
HOXD11P31277 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC9.16□□□□□ -0.94
HOXD11P31277 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
HOXD11P31277 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
HOXD11P31277 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
HOXD11P31277 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
HOXD11P31277 PUS7-201ENST00000356362 3480 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
HOXD11P31277 AC109446.4-201ENST00000623235 2755 ntBASIC9.16□□□□□ -0.94
HOXD11P31277 SORBS2-209ENST00000418609 5529 ntTSL 2 BASIC9.16□□□□□ -0.94
HOXD11P31277 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
HOXD11P31277 PRPF8-201ENST00000304992 7295 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
HOXD11P31277 SORCS1-203ENST00000369698 2638 ntTSL 5 BASIC9.16□□□□□ -0.94
HOXD11P31277 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
HOXD11P31277 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
HOXD11P31277 RNU6-106P-201ENST00000384405 107 ntBASIC9.16□□□□□ -0.94
HOXD11P31277 COX6B1-202ENST00000392201 435 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
HOXD11P31277 RNU2-22P-201ENST00000411266 212 ntBASIC9.16□□□□□ -0.94
HOXD11P31277 LINC01703-201ENST00000412855 423 ntTSL 5 BASIC9.16□□□□□ -0.94
HOXD11P31277 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC9.16□□□□□ -0.94
HOXD11P31277 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC9.16□□□□□ -0.94
HOXD11P31277 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC9.16□□□□□ -0.94
HOXD11P31277 YRDCP3-201ENST00000456507 480 ntBASIC9.16□□□□□ -0.94
HOXD11P31277 RN7SKP241-201ENST00000464584 291 ntBASIC9.16□□□□□ -0.94
HOXD11P31277 AC005532.2-201ENST00000467154 373 ntBASIC9.16□□□□□ -0.94
HOXD11P31277 RN7SL241P-201ENST00000482973 236 ntBASIC9.16□□□□□ -0.94
HOXD11P31277 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC9.16□□□□□ -0.94
HOXD11P31277 RNU5F-2P-201ENST00000516066 82 ntBASIC9.16□□□□□ -0.94
HOXD11P31277 MIR6889-201ENST00000613185 59 ntBASIC9.16□□□□□ -0.94
HOXD11P31277 AC027139.2-201ENST00000615639 448 ntBASIC9.16□□□□□ -0.94
HOXD11P31277 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC9.16□□□□□ -0.94
HOXD11P31277 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 268.2 ms