Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.48□□□□□ -1.69
PTPN6P29350 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.48□□□□□ -1.69
PTPN6P29350 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.48□□□□□ -1.69
PTPN6P29350 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN6P29350 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN6P29350 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PTPN6P29350 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN6P29350 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.47□□□□□ -1.69
PTPN6P29350 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
PTPN6P29350 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.47□□□□□ -1.69
PTPN6P29350 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PTPN6P29350 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
PTPN6P29350 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN6P29350 Z73965.1-201ENST00000623412 2297 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN6P29350 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.47□□□□□ -1.69
PTPN6P29350 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN6P29350 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN6P29350 RN7SKP115-201ENST00000363177 317 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN6P29350 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.47□□□□□ -1.69
PTPN6P29350 RNA5SP87-201ENST00000384155 118 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 MIR195-201ENST00000385194 87 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 RNU6-244P-201ENST00000391028 104 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 CCNB2P1-201ENST00000399411 1150 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 OR1F12-201ENST00000402365 945 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 RANP4-201ENST00000413361 655 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 AC007559.1-201ENST00000428736 355 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 SLC25A18P1-201ENST00000449385 454 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 TPRKBP1-201ENST00000456243 481 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 AC104971.1-201ENST00000495117 578 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.47□□□□□ -1.69
PTPN6P29350 SUMO1P1-201ENST00000497904 306 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 AC105233.1-201ENST00000498840 781 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 ARL4AP1-201ENST00000503220 705 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.47□□□□□ -1.69
PTPN6P29350 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.47□□□□□ -1.69
PTPN6P29350 RNA5SP446-201ENST00000515955 82 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 BUD31P1-201ENST00000521828 359 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN6P29350 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.47□□□□□ -1.69
PTPN6P29350 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.47□□□□□ -1.69
PTPN6P29350 HMGB3P26-201ENST00000560051 582 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.47□□□□□ -1.69
PTPN6P29350 MIR4480-201ENST00000582492 71 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 AC110743.1-201ENST00000584870 478 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.47□□□□□ -1.69
PTPN6P29350 AC022726.1-201ENST00000587475 207 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 AC104785.1-201ENST00000603220 588 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 MIR6748-201ENST00000610433 71 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 uc_338.18-201ENST00000615451 175 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 AC123768.4-201ENST00000616244 701 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 AC007342.8-201ENST00000623278 678 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.47□□□□□ -1.69
PTPN6P29350 AC107068.1-201ENST00000563286 4218 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN6P29350 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
PTPN6P29350 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PTPN6P29350 AC074029.4-201ENST00000624796 1859 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 DDX18P4-201ENST00000511690 1966 ntBASIC4.47□□□□□ -1.69
PTPN6P29350 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN6P29350 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN6P29350 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN6P29350 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPN6P29350 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PTPN6P29350 AC120338.1-201ENST00000625074 1541 ntBASIC4.46□□□□□ -1.69
PTPN6P29350 EOGT-210ENST00000615922 1931 ntBASIC4.46□□□□□ -1.69
PTPN6P29350 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PTPN6P29350 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PTPN6P29350 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PTPN6P29350 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN6P29350 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.46□□□□□ -1.7
PTPN6P29350 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPN6P29350 SAMMSON-226ENST00000642089 1582 ntBASIC4.46□□□□□ -1.7
PTPN6P29350 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN6P29350 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN6P29350 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN6P29350 RN7SKP199-201ENST00000410325 305 ntBASIC4.46□□□□□ -1.7
PTPN6P29350 RN7SKP216-201ENST00000411050 312 ntBASIC4.46□□□□□ -1.7
PTPN6P29350 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN6P29350 AL360081.1-201ENST00000428299 555 ntBASIC4.46□□□□□ -1.7
PTPN6P29350 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.46□□□□□ -1.7
PTPN6P29350 AC008072.1-201ENST00000434254 824 ntBASIC4.46□□□□□ -1.7
PTPN6P29350 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPN6P29350 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.46□□□□□ -1.7
PTPN6P29350 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPN6P29350 MTND2P3-201ENST00000452458 470 ntBASIC4.46□□□□□ -1.7
PTPN6P29350 ATP5G1P3-201ENST00000463301 410 ntBASIC4.46□□□□□ -1.7
PTPN6P29350 AC063943.1-201ENST00000465434 453 ntBASIC4.46□□□□□ -1.7
PTPN6P29350 AC010683.1-201ENST00000473673 378 ntBASIC4.46□□□□□ -1.7
PTPN6P29350 MTCO1P31-201ENST00000506355 492 ntBASIC4.46□□□□□ -1.7
PTPN6P29350 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.46□□□□□ -1.7
PTPN6P29350 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPN6P29350 NPM1P47-201ENST00000560843 856 ntBASIC4.46□□□□□ -1.7
PTPN6P29350 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPN6P29350 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPN6P29350 MIR4512-201ENST00000583257 77 ntBASIC4.46□□□□□ -1.7
PTPN6P29350 MIR4737-201ENST00000583979 81 ntBASIC4.46□□□□□ -1.7
PTPN6P29350 MTCO3P22-201ENST00000603219 784 ntBASIC4.46□□□□□ -1.7
PTPN6P29350 MIR6820-201ENST00000611508 62 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms