Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL354984.3-201ENST00000604803 325 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 AC025175.1-201ENST00000606482 759 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 AP002360.3-201ENST00000607673 710 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 AC092653.1-201ENST00000608509 531 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.67□□□□□ -1.82
COL8A2P25067 AC068831.8-201ENST00000620171 435 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 AC068724.3-201ENST00000625906 87 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 AC140479.6-201ENST00000633535 357 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL8A2P25067 AP000756.2-201ENST00000624168 2567 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
COL8A2P25067 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.67□□□□□ -1.82
COL8A2P25067 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL8A2P25067 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
COL8A2P25067 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
COL8A2P25067 DDX18P6-201ENST00000450119 1997 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 THAP12P8-201ENST00000447914 2115 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
COL8A2P25067 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL8A2P25067 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL8A2P25067 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
COL8A2P25067 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.66□□□□□ -1.82
COL8A2P25067 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
COL8A2P25067 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL8A2P25067 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL8A2P25067 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL8A2P25067 RNA5SP175-201ENST00000364275 119 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 RN7SKP227-201ENST00000364445 330 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 RNA5SP479-201ENST00000364858 117 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 AL672167.2-201ENST00000377164 879 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 SNORA70C-201ENST00000384538 135 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 AL583835.1-201ENST00000399570 407 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.66□□□□□ -1.82
COL8A2P25067 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.66□□□□□ -1.82
COL8A2P25067 RPL23AP38-201ENST00000423801 469 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 CDY14P-201ENST00000431260 1014 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.66□□□□□ -1.82
COL8A2P25067 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.66□□□□□ -1.82
COL8A2P25067 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.66□□□□□ -1.82
COL8A2P25067 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.66□□□□□ -1.82
COL8A2P25067 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL8A2P25067 CDY12P-201ENST00000440679 1015 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 HMGB3P9-201ENST00000441799 583 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 CDY13P-201ENST00000445813 1015 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.66□□□□□ -1.82
COL8A2P25067 CDY23P-201ENST00000451661 1014 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 VN1R32P-201ENST00000452234 905 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.66□□□□□ -1.82
COL8A2P25067 AC104849.1-201ENST00000462623 405 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 RPL7P22-201ENST00000466005 733 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 STRADBP1-201ENST00000478954 1281 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.66□□□□□ -1.82
COL8A2P25067 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 AC108475.1-201ENST00000507880 950 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.66□□□□□ -1.82
COL8A2P25067 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.66□□□□□ -1.82
COL8A2P25067 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL8A2P25067 RNA5SP49-201ENST00000516450 115 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 RN7SKP21-201ENST00000516503 220 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 MRPL49P2-201ENST00000521066 465 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.66□□□□□ -1.82
COL8A2P25067 AP003730.1-201ENST00000524605 285 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.66□□□□□ -1.82
COL8A2P25067 AL109766.1-201ENST00000555080 552 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 TVP23BP1-201ENST00000557500 617 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.66□□□□□ -1.82
COL8A2P25067 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.66□□□□□ -1.82
COL8A2P25067 AC007224.1-201ENST00000564410 144 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.66□□□□□ -1.82
COL8A2P25067 AC015849.6-201ENST00000605454 474 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 AC023043.4-201ENST00000612081 449 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 AL021997.2-201ENST00000615674 271 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL8A2P25067 AC017104.4-201ENST00000636283 1592 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL8A2P25067 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL8A2P25067 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL8A2P25067 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.66□□□□□ -1.82
COL8A2P25067 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL8A2P25067 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL8A2P25067 AC068254.2-201ENST00000623938 3577 ntBASIC3.66□□□□□ -1.82
COL8A2P25067 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL8A2P25067 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
COL8A2P25067 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
COL8A2P25067 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.65□□□□□ -1.82
COL8A2P25067 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.65□□□□□ -1.82
COL8A2P25067 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
COL8A2P25067 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
COL8A2P25067 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.65□□□□□ -1.82
COL8A2P25067 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
COL8A2P25067 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.65□□□□□ -1.82
COL8A2P25067 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL8A2P25067 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.65□□□□□ -1.83
COL8A2P25067 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
COL8A2P25067 MIR383-201ENST00000362257 73 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 RPS24P12-201ENST00000402084 394 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 AL035696.2-201ENST00000407941 709 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 RNA5SP36-201ENST00000410197 133 ntBASIC3.65□□□□□ -1.83
COL8A2P25067 SNORA79B-201ENST00000410557 148 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms