Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.04□□□□□ -1.6
CAPN3P20807 AC011242.1-201ENST00000433596 1158 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.04□□□□□ -1.6
CAPN3P20807 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.04□□□□□ -1.6
CAPN3P20807 AL390119.1-201ENST00000440329 312 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 CYCSP24-201ENST00000445119 316 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 AC005002.1-201ENST00000447458 540 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 AL050341.1-201ENST00000447743 313 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 HMGN1P5-201ENST00000448591 263 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.04□□□□□ -1.6
CAPN3P20807 DNAJB5P1-201ENST00000454004 806 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 RPL21P18-201ENST00000469899 480 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 AC023424.1-201ENST00000496058 459 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.04□□□□□ -1.6
CAPN3P20807 AC026414.1-201ENST00000504046 698 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.04□□□□□ -1.6
CAPN3P20807 MTATP6P22-201ENST00000507369 598 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 HMGB1P44-201ENST00000508597 572 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.04□□□□□ -1.6
CAPN3P20807 OR51K1P-201ENST00000510214 950 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 OR5H4P-201ENST00000510851 923 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.04□□□□□ -1.6
CAPN3P20807 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.04□□□□□ -1.6
CAPN3P20807 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.04□□□□□ -1.6
CAPN3P20807 IGJP1-201ENST00000522682 475 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.04□□□□□ -1.6
CAPN3P20807 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.04□□□□□ -1.6
CAPN3P20807 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CAPN3P20807 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.04□□□□□ -1.6
CAPN3P20807 SUGT1P3-202ENST00000604259 383 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.04□□□□□ -1.6
CAPN3P20807 AC090510.2-201ENST00000617465 629 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CAPN3P20807 AC022079.2-201ENST00000619739 566 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 AP006248.2-201ENST00000623309 592 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 AP001784.1-201ENST00000624107 428 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.04□□□□□ -1.6
CAPN3P20807 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.04□□□□□ -1.6
CAPN3P20807 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CAPN3P20807 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.04□□□□□ -1.6
CAPN3P20807 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CAPN3P20807 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.04□□□□□ -1.6
CAPN3P20807 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CAPN3P20807 ERCC6-202ENST00000374127 1782 ntBASIC5.04□□□□□ -1.6
CAPN3P20807 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.03□□□□□ -1.6
CAPN3P20807 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CAPN3P20807 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.03□□□□□ -1.6
CAPN3P20807 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CAPN3P20807 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CAPN3P20807 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CAPN3P20807 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CAPN3P20807 AC025574.1-201ENST00000554784 1653 ntBASIC5.03□□□□□ -1.6
CAPN3P20807 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CAPN3P20807 RNA5SP391-201ENST00000363456 119 ntBASIC5.03□□□□□ -1.6
CAPN3P20807 RNU5B-4P-201ENST00000363508 111 ntBASIC5.03□□□□□ -1.6
CAPN3P20807 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.03□□□□□ -1.6
CAPN3P20807 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.03□□□□□ -1.6
CAPN3P20807 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.03□□□□□ -1.6
CAPN3P20807 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.03□□□□□ -1.6
CAPN3P20807 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.03□□□□□ -1.6
CAPN3P20807 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.03□□□□□ -1.6
CAPN3P20807 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.03□□□□□ -1.6
CAPN3P20807 AC004865.1-201ENST00000442276 1003 ntBASIC5.03□□□□□ -1.6
CAPN3P20807 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.03□□□□□ -1.6
CAPN3P20807 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.03□□□□□ -1.6
CAPN3P20807 BX842559.2-201ENST00000451418 605 ntBASIC5.03□□□□□ -1.6
CAPN3P20807 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.03□□□□□ -1.6
CAPN3P20807 AC079168.1-201ENST00000458741 345 ntBASIC5.03□□□□□ -1.6
CAPN3P20807 RN7SL51P-201ENST00000468230 285 ntBASIC5.03□□□□□ -1.6
CAPN3P20807 RPL35AP19-201ENST00000469425 329 ntBASIC5.03□□□□□ -1.6
CAPN3P20807 AC015724.1-201ENST00000478577 156 ntBASIC5.03□□□□□ -1.6
CAPN3P20807 RN7SL423P-201ENST00000486202 304 ntBASIC5.03□□□□□ -1.6
CAPN3P20807 AC069304.1-201ENST00000491593 704 ntBASIC5.03□□□□□ -1.6
CAPN3P20807 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.03□□□□□ -1.6
CAPN3P20807 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.03□□□□□ -1.6
CAPN3P20807 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.03□□□□□ -1.6
CAPN3P20807 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.03□□□□□ -1.6
CAPN3P20807 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.03□□□□□ -1.6
CAPN3P20807 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.03□□□□□ -1.6
CAPN3P20807 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.03□□□□□ -1.6
CAPN3P20807 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.03□□□□□ -1.6
CAPN3P20807 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.03□□□□□ -1.6
CAPN3P20807 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.03□□□□□ -1.6
CAPN3P20807 HMGB3P26-201ENST00000560051 582 ntBASIC5.03□□□□□ -1.6
CAPN3P20807 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CAPN3P20807 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.03□□□□□ -1.6
CAPN3P20807 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.03□□□□□ -1.6
CAPN3P20807 AC008507.2-201ENST00000588402 1176 ntBASIC5.03□□□□□ -1.6
CAPN3P20807 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CAPN3P20807 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CAPN3P20807 AC010872.1-201ENST00000624225 675 ntBASIC5.03□□□□□ -1.6
CAPN3P20807 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CAPN3P20807 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CAPN3P20807 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CAPN3P20807 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CAPN3P20807 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CAPN3P20807 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.03□□□□□ -1.6
CAPN3P20807 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CAPN3P20807 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms