Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC099563.1-201ENST00000456086 418 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 RPL5P12-201ENST00000477071 851 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.6□□□□□ -1.35
NFKB1P19838 AC026427.2-201ENST00000506228 536 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 AC091965.3-201ENST00000506236 208 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 AC093870.1-201ENST00000506837 213 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC6.6□□□□□ -1.35
NFKB1P19838 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.6□□□□□ -1.35
NFKB1P19838 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC6.6□□□□□ -1.35
NFKB1P19838 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC6.6□□□□□ -1.35
NFKB1P19838 SNORA81.2-201ENST00000516868 170 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.6□□□□□ -1.35
NFKB1P19838 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC6.6□□□□□ -1.35
NFKB1P19838 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.6□□□□□ -1.35
NFKB1P19838 AP000790.1-201ENST00000528891 737 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.6□□□□□ -1.35
NFKB1P19838 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC6.6□□□□□ -1.35
NFKB1P19838 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC6.6□□□□□ -1.35
NFKB1P19838 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
NFKB1P19838 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.6□□□□□ -1.35
NFKB1P19838 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NFKB1P19838 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC6.6□□□□□ -1.35
NFKB1P19838 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.6□□□□□ -1.35
NFKB1P19838 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.6□□□□□ -1.35
NFKB1P19838 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC6.6□□□□□ -1.35
NFKB1P19838 AC092718.4-201ENST00000566639 716 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.6□□□□□ -1.35
NFKB1P19838 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.6□□□□□ -1.35
NFKB1P19838 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.6□□□□□ -1.35
NFKB1P19838 AC022916.3-201ENST00000592961 742 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 RPL7AP69-201ENST00000595306 806 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.6□□□□□ -1.35
NFKB1P19838 AC012065.3-201ENST00000602736 439 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 AC012175.1-201ENST00000603755 531 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 AC114477.1-201ENST00000605097 605 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 AL133255.1-201ENST00000606374 441 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC6.6□□□□□ -1.35
NFKB1P19838 AC063952.1-203ENST00000634410 658 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
NFKB1P19838 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.6□□□□□ -1.35
NFKB1P19838 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NFKB1P19838 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NFKB1P19838 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
NFKB1P19838 SAGE3P-201ENST00000619800 1635 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
NFKB1P19838 ATP8A2P2-201ENST00000437678 1568 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
NFKB1P19838 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.6□□□□□ -1.35
NFKB1P19838 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.6□□□□□ -1.35
NFKB1P19838 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.6□□□□□ -1.35
NFKB1P19838 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NFKB1P19838 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.6□□□□□ -1.35
NFKB1P19838 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NFKB1P19838 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
NFKB1P19838 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NFKB1P19838 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NFKB1P19838 OLMALINC-203ENST00000641087 3779 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NFKB1P19838 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
NFKB1P19838 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
NFKB1P19838 AL022323.4-201ENST00000623980 13120 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NFKB1P19838 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NFKB1P19838 Y_RNA.157-201ENST00000363638 102 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
NFKB1P19838 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.59□□□□□ -1.35
NFKB1P19838 RNA5SP155-201ENST00000411154 129 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.59□□□□□ -1.35
NFKB1P19838 OR9R1P-201ENST00000412200 877 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.59□□□□□ -1.35
NFKB1P19838 AL136133.1-201ENST00000413694 376 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 AC004987.3-201ENST00000413879 771 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NFKB1P19838 AC092634.6-201ENST00000418558 192 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC6.59□□□□□ -1.35
NFKB1P19838 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.59□□□□□ -1.35
NFKB1P19838 RAD23BP1-201ENST00000421404 1227 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 TEX41-204ENST00000423031 491 ntTSL 4 BASIC6.59□□□□□ -1.35
NFKB1P19838 RIMKLBP2-201ENST00000424737 654 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 DYNLL1P7-201ENST00000429273 258 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NFKB1P19838 AC002504.1-201ENST00000438281 691 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 RPL7P54-201ENST00000438336 674 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.59□□□□□ -1.35
NFKB1P19838 HMGN1P36-201ENST00000446623 298 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.59□□□□□ -1.35
NFKB1P19838 AL121877.1-201ENST00000453704 622 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 RPL31P11-202ENST00000454082 372 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 MTND1P12-201ENST00000455231 147 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 NF1P3-201ENST00000457709 450 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
NFKB1P19838 AC022730.1-201ENST00000473114 568 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 MTND1P3-201ENST00000484956 952 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.59□□□□□ -1.35
NFKB1P19838 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NFKB1P19838 SNORA19.2-201ENST00000516013 114 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 RNU6-277P-201ENST00000516272 106 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 SNORA48.10-201ENST00000516965 160 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 TPM3P3-201ENST00000521343 354 ntBASIC6.59□□□□□ -1.35
NFKB1P19838 AC131935.1-201ENST00000524621 333 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms