Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LIG1P18858 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6.79□□□□□ -1.32
LIG1P18858 AC234064.1-201ENST00000436312 247 ntBASIC6.79□□□□□ -1.32
LIG1P18858 RPS12P17-201ENST00000438591 377 ntBASIC6.79□□□□□ -1.32
LIG1P18858 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.79□□□□□ -1.32
LIG1P18858 MTCO1P48-201ENST00000448024 1096 ntBASIC6.79□□□□□ -1.32
LIG1P18858 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LIG1P18858 MTCO3P11-201ENST00000455103 774 ntBASIC6.79□□□□□ -1.32
LIG1P18858 AC041039.1-201ENST00000485656 536 ntBASIC6.79□□□□□ -1.32
LIG1P18858 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.79□□□□□ -1.32
LIG1P18858 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.79□□□□□ -1.32
LIG1P18858 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6.79□□□□□ -1.32
LIG1P18858 IGBP1P5-201ENST00000507524 1000 ntBASIC6.79□□□□□ -1.32
LIG1P18858 AC090958.1-201ENST00000511122 351 ntBASIC6.79□□□□□ -1.32
LIG1P18858 RNU6-718P-201ENST00000516166 105 ntBASIC6.79□□□□□ -1.32
LIG1P18858 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC6.79□□□□□ -1.32
LIG1P18858 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.79□□□□□ -1.32
LIG1P18858 TOMM20P1-201ENST00000534518 427 ntBASIC6.79□□□□□ -1.32
LIG1P18858 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC6.79□□□□□ -1.32
LIG1P18858 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.79□□□□□ -1.32
LIG1P18858 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.79□□□□□ -1.32
LIG1P18858 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.79□□□□□ -1.32
LIG1P18858 AC007014.2-201ENST00000615581 479 ntBASIC6.79□□□□□ -1.32
LIG1P18858 AC096861.1-201ENST00000616652 240 ntBASIC6.79□□□□□ -1.32
LIG1P18858 AC022400.9-201ENST00000623633 273 ntBASIC6.79□□□□□ -1.32
LIG1P18858 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LIG1P18858 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LIG1P18858 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LIG1P18858 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LIG1P18858 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LIG1P18858 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LIG1P18858 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.79□□□□□ -1.32
LIG1P18858 AC006484.1-201ENST00000435086 1884 ntBASIC6.79□□□□□ -1.32
LIG1P18858 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
LIG1P18858 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
LIG1P18858 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.78□□□□□ -1.32
LIG1P18858 SPATA2P1-201ENST00000431223 2055 ntBASIC6.78□□□□□ -1.32
LIG1P18858 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LIG1P18858 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
LIG1P18858 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.78□□□□□ -1.32
LIG1P18858 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
LIG1P18858 AC020656.2-201ENST00000613291 5309 ntBASIC6.78□□□□□ -1.32
LIG1P18858 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
LIG1P18858 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
LIG1P18858 RNU6-621P-201ENST00000364752 109 ntBASIC6.78□□□□□ -1.32
LIG1P18858 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
LIG1P18858 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
LIG1P18858 RNU4-31P-201ENST00000384211 141 ntBASIC6.78□□□□□ -1.32
LIG1P18858 MIR130B-202ENST00000385018 82 ntBASIC6.78□□□□□ -1.32
LIG1P18858 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
LIG1P18858 VTA1P1-201ENST00000414044 866 ntBASIC6.78□□□□□ -1.32
LIG1P18858 AL354868.1-201ENST00000417077 482 ntBASIC6.78□□□□□ -1.32
LIG1P18858 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.78□□□□□ -1.32
LIG1P18858 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.78□□□□□ -1.32
LIG1P18858 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.78□□□□□ -1.32
LIG1P18858 AC112653.1-201ENST00000443851 386 ntBASIC6.78□□□□□ -1.32
LIG1P18858 AC005002.1-201ENST00000447458 540 ntBASIC6.78□□□□□ -1.32
LIG1P18858 MTND5P20-201ENST00000448677 143 ntBASIC6.78□□□□□ -1.32
LIG1P18858 AC002553.3-201ENST00000453002 341 ntBASIC6.78□□□□□ -1.32
LIG1P18858 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.78□□□□□ -1.32
LIG1P18858 Z83838.1-202ENST00000456225 839 ntBASIC6.78□□□□□ -1.32
LIG1P18858 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LIG1P18858 TMED11P-201ENST00000479478 690 ntBASIC6.78□□□□□ -1.32
LIG1P18858 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.78□□□□□ -1.32
LIG1P18858 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC6.78□□□□□ -1.32
LIG1P18858 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LIG1P18858 ATP1B1P1-201ENST00000509767 915 ntBASIC6.78□□□□□ -1.32
LIG1P18858 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.78□□□□□ -1.32
LIG1P18858 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC6.78□□□□□ -1.32
LIG1P18858 AC090424.1-201ENST00000535243 736 ntBASIC6.78□□□□□ -1.32
LIG1P18858 OR11J2P-201ENST00000555298 907 ntBASIC6.78□□□□□ -1.32
LIG1P18858 AC018552.1-201ENST00000562099 811 ntBASIC6.78□□□□□ -1.32
LIG1P18858 MIR4701-201ENST00000583094 63 ntBASIC6.78□□□□□ -1.32
LIG1P18858 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.78□□□□□ -1.32
LIG1P18858 AL390816.3-201ENST00000604527 1066 ntBASIC6.78□□□□□ -1.32
LIG1P18858 RNU4-89P-201ENST00000607443 133 ntBASIC6.78□□□□□ -1.32
LIG1P18858 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.78□□□□□ -1.32
LIG1P18858 AC099654.5-201ENST00000636479 350 ntBASIC6.78□□□□□ -1.32
LIG1P18858 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.78□□□□□ -1.32
LIG1P18858 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LIG1P18858 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.78□□□□□ -1.32
LIG1P18858 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
LIG1P18858 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
LIG1P18858 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
LIG1P18858 AL591135.1-201ENST00000401578 5914 ntBASIC6.78□□□□□ -1.32
LIG1P18858 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
LIG1P18858 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LIG1P18858 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.32
LIG1P18858 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LIG1P18858 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LIG1P18858 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC6.77□□□□□ -1.33
LIG1P18858 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
LIG1P18858 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LIG1P18858 HSPD1P9-201ENST00000420325 1636 ntBASIC6.77□□□□□ -1.33
LIG1P18858 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
LIG1P18858 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LIG1P18858 SNORA51.9-201ENST00000384295 124 ntBASIC6.77□□□□□ -1.33
LIG1P18858 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
LIG1P18858 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.77□□□□□ -1.33
LIG1P18858 MRPS36P1-201ENST00000421291 307 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms