Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFRAP16234 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.94□□□□□ -1.62
PDGFRAP16234 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
PDGFRAP16234 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFRAP16234 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PDGFRAP16234 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PDGFRAP16234 ZFRP1-201ENST00000457579 2970 ntBASIC4.94□□□□□ -1.62
PDGFRAP16234 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFRAP16234 AC009313.2-201ENST00000417893 1941 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFRAP16234 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.93□□□□□ -1.62
PDGFRAP16234 AC120338.1-201ENST00000625074 1541 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
PDGFRAP16234 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFRAP16234 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.93□□□□□ -1.62
PDGFRAP16234 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PDGFRAP16234 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.93□□□□□ -1.62
PDGFRAP16234 RPL6P29-201ENST00000414863 865 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.93□□□□□ -1.62
PDGFRAP16234 AC023141.6-201ENST00000429418 337 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 MTCO1P52-201ENST00000433928 531 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 RPL34P26-201ENST00000445636 354 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 TDGF1P1-201ENST00000445734 527 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 AC104651.2-201ENST00000447549 528 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFRAP16234 MTND2P30-201ENST00000456663 382 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 CYCSP34-201ENST00000458172 304 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 AL591473.1-201ENST00000464297 313 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFRAP16234 AC138938.1-201ENST00000515431 782 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.93□□□□□ -1.62
PDGFRAP16234 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.93□□□□□ -1.62
PDGFRAP16234 AC093014.1-201ENST00000548926 724 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.93□□□□□ -1.62
PDGFRAP16234 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.93□□□□□ -1.62
PDGFRAP16234 AC022884.3-201ENST00000579571 248 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.93□□□□□ -1.62
PDGFRAP16234 AL671309.1-201ENST00000603750 544 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 AC110792.4-201ENST00000609843 298 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 AL136295.6-201ENST00000610486 658 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 MIR1264-201ENST00000616374 69 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 AP004607.9-201ENST00000618202 316 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 AC083843.3-201ENST00000623679 2186 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.93□□□□□ -1.62
PDGFRAP16234 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.93□□□□□ -1.62
PDGFRAP16234 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.93□□□□□ -1.62
PDGFRAP16234 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PDGFRAP16234 AP001642.1-201ENST00000624727 2117 ntBASIC4.93□□□□□ -1.62
PDGFRAP16234 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.93□□□□□ -1.62
PDGFRAP16234 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.93□□□□□ -1.62
PDGFRAP16234 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.93□□□□□ -1.62
PDGFRAP16234 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFRAP16234 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFRAP16234 AC093311.1-201ENST00000506586 2021 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFRAP16234 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFRAP16234 VN2R3P-201ENST00000422626 1412 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFRAP16234 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFRAP16234 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFRAP16234 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
PDGFRAP16234 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFRAP16234 OR52B1P-201ENST00000316506 909 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 RNVU1-6-201ENST00000364688 164 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFRAP16234 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.92□□□□□ -1.62
PDGFRAP16234 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PDGFRAP16234 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PDGFRAP16234 OR51B3P-201ENST00000412287 913 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 AC019050.1-201ENST00000418508 492 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 EIF4A1P1-201ENST00000420241 934 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 FABP7P2-201ENST00000429946 379 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 RPL12P46-201ENST00000436610 195 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 AC005154.2-201ENST00000438110 379 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 RPS26P2-201ENST00000440331 348 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 RPL36AP15-201ENST00000444514 266 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 H2AFZP5-201ENST00000446960 382 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.92□□□□□ -1.62
PDGFRAP16234 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.92□□□□□ -1.62
PDGFRAP16234 RNA5SP103-201ENST00000459503 118 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 AC090142.1-201ENST00000465776 462 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 AC006967.1-201ENST00000467608 589 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 AC112206.1-201ENST00000468416 477 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 AC108729.2-201ENST00000476543 840 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 AC008897.1-201ENST00000494006 347 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 AC025164.1-201ENST00000496249 478 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFRAP16234 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.92□□□□□ -1.62
PDGFRAP16234 RN7SKP46-201ENST00000515942 234 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.92□□□□□ -1.62
PDGFRAP16234 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.92□□□□□ -1.62
PDGFRAP16234 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFRAP16234 AC137768.1-201ENST00000549998 553 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFRAP16234 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.92□□□□□ -1.62
PDGFRAP16234 RN7SL652P-201ENST00000577769 300 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFRAP16234 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.92□□□□□ -1.62
PDGFRAP16234 AC090948.2-201ENST00000607363 564 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms