Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC008033.1-201ENST00000216407 1162 ntBASIC5.2□□□□□ -1.58
TOP1P11387 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TOP1P11387 FAM3C2-201ENST00000312214 681 ntBASIC5.2□□□□□ -1.58
TOP1P11387 Y_RNA.62-201ENST00000362840 99 ntBASIC5.2□□□□□ -1.58
TOP1P11387 RNA5SP151-201ENST00000365632 117 ntBASIC5.2□□□□□ -1.58
TOP1P11387 AL512430.2-201ENST00000406786 339 ntBASIC5.2□□□□□ -1.58
TOP1P11387 RNA5SP146-201ENST00000410743 123 ntBASIC5.2□□□□□ -1.58
TOP1P11387 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.2□□□□□ -1.58
TOP1P11387 AC004690.1-201ENST00000418216 328 ntBASIC5.2□□□□□ -1.58
TOP1P11387 RPS29P17-201ENST00000430795 166 ntBASIC5.2□□□□□ -1.58
TOP1P11387 CBX1P1-201ENST00000440184 427 ntBASIC5.2□□□□□ -1.58
TOP1P11387 RPL7P33-201ENST00000444159 742 ntBASIC5.2□□□□□ -1.58
TOP1P11387 RN7SL98P-201ENST00000462271 300 ntBASIC5.2□□□□□ -1.58
TOP1P11387 ATP5G1P3-201ENST00000463301 410 ntBASIC5.2□□□□□ -1.58
TOP1P11387 AC092905.1-201ENST00000467527 949 ntBASIC5.2□□□□□ -1.58
TOP1P11387 AC026979.1-201ENST00000492525 396 ntBASIC5.2□□□□□ -1.58
TOP1P11387 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.2□□□□□ -1.58
TOP1P11387 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.2□□□□□ -1.58
TOP1P11387 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.2□□□□□ -1.58
TOP1P11387 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.2□□□□□ -1.58
TOP1P11387 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.2□□□□□ -1.58
TOP1P11387 SLC25A36P1-201ENST00000590111 465 ntBASIC5.2□□□□□ -1.58
TOP1P11387 AC103792.1-201ENST00000603591 919 ntBASIC5.2□□□□□ -1.58
TOP1P11387 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.2□□□□□ -1.58
TOP1P11387 AC083809.1-201ENST00000615051 472 ntBASIC5.2□□□□□ -1.58
TOP1P11387 AC091905.2-201ENST00000623143 306 ntBASIC5.2□□□□□ -1.58
TOP1P11387 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.2□□□□□ -1.58
TOP1P11387 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.2□□□□□ -1.58
TOP1P11387 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TOP1P11387 OR51C1P-202ENST00000641159 1444 ntBASIC5.2□□□□□ -1.58
TOP1P11387 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TOP1P11387 AC000123.3-201ENST00000624029 4975 ntBASIC5.2□□□□□ -1.58
TOP1P11387 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.2□□□□□ -1.58
TOP1P11387 AC090017.1-201ENST00000548612 1779 ntBASIC5.19□□□□□ -1.58
TOP1P11387 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
TOP1P11387 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
TOP1P11387 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TOP1P11387 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TOP1P11387 OR4K17-201ENST00000315543 1032 ntBASIC5.19□□□□□ -1.58
TOP1P11387 RPL32P3-201ENST00000359025 275 ntBASIC5.19□□□□□ -1.58
TOP1P11387 RNU1-63P-201ENST00000383902 164 ntBASIC5.19□□□□□ -1.58
TOP1P11387 MIR3065-201ENST00000390137 79 ntBASIC5.19□□□□□ -1.58
TOP1P11387 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.19□□□□□ -1.58
TOP1P11387 AL139095.3-201ENST00000419672 1203 ntBASIC5.19□□□□□ -1.58
TOP1P11387 COX6CP17-201ENST00000421389 185 ntBASIC5.19□□□□□ -1.58
TOP1P11387 GAPDHP49-201ENST00000421421 961 ntBASIC5.19□□□□□ -1.58
TOP1P11387 AL590609.2-201ENST00000421430 368 ntBASIC5.19□□□□□ -1.58
TOP1P11387 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.19□□□□□ -1.58
TOP1P11387 PHBP16-201ENST00000446318 950 ntBASIC5.19□□□□□ -1.58
TOP1P11387 RPS23P7-201ENST00000466210 444 ntBASIC5.19□□□□□ -1.58
TOP1P11387 STMN1P2-201ENST00000508435 439 ntBASIC5.19□□□□□ -1.58
TOP1P11387 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.19□□□□□ -1.58
TOP1P11387 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.19□□□□□ -1.58
TOP1P11387 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.19□□□□□ -1.58
TOP1P11387 AC105105.5-201ENST00000622635 1294 ntBASIC5.19□□□□□ -1.58
TOP1P11387 AC011944.2-201ENST00000624440 683 ntBASIC5.19□□□□□ -1.58
TOP1P11387 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TOP1P11387 DDX18P3-201ENST00000404856 2007 ntBASIC5.19□□□□□ -1.58
TOP1P11387 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
TOP1P11387 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TOP1P11387 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.19□□□□□ -1.58
TOP1P11387 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
TOP1P11387 CCT8P1-201ENST00000413611 1657 ntBASIC5.18□□□□□ -1.58
TOP1P11387 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
TOP1P11387 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TOP1P11387 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TOP1P11387 RAB28P1-201ENST00000411517 641 ntBASIC5.18□□□□□ -1.58
TOP1P11387 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.18□□□□□ -1.58
TOP1P11387 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.18□□□□□ -1.58
TOP1P11387 AC062016.2-201ENST00000420950 676 ntBASIC5.18□□□□□ -1.58
TOP1P11387 PDSS1P1-201ENST00000422953 1114 ntBASIC5.18□□□□□ -1.58
TOP1P11387 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.18□□□□□ -1.58
TOP1P11387 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.18□□□□□ -1.58
TOP1P11387 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.18□□□□□ -1.58
TOP1P11387 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.18□□□□□ -1.58
TOP1P11387 AC114495.1-201ENST00000441274 436 ntBASIC5.18□□□□□ -1.58
TOP1P11387 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.18□□□□□ -1.58
TOP1P11387 RPL23AP65-201ENST00000475608 468 ntBASIC5.18□□□□□ -1.58
TOP1P11387 AC108022.1-201ENST00000493466 478 ntBASIC5.18□□□□□ -1.58
TOP1P11387 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.18□□□□□ -1.58
TOP1P11387 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.18□□□□□ -1.58
TOP1P11387 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.18□□□□□ -1.58
TOP1P11387 OR8X1P-201ENST00000534542 869 ntBASIC5.18□□□□□ -1.58
TOP1P11387 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.18□□□□□ -1.58
TOP1P11387 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.18□□□□□ -1.58
TOP1P11387 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.18□□□□□ -1.58
TOP1P11387 AC027455.1-201ENST00000574104 594 ntBASIC5.18□□□□□ -1.58
TOP1P11387 RN7SL176P-201ENST00000580352 264 ntBASIC5.18□□□□□ -1.58
TOP1P11387 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.18□□□□□ -1.58
TOP1P11387 AC079587.1-201ENST00000603846 277 ntBASIC5.18□□□□□ -1.58
TOP1P11387 AC233280.2-201ENST00000603917 1070 ntBASIC5.18□□□□□ -1.58
TOP1P11387 AP002360.3-201ENST00000607673 710 ntBASIC5.18□□□□□ -1.58
TOP1P11387 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.18□□□□□ -1.58
TOP1P11387 AC015908.5-201ENST00000623289 343 ntBASIC5.18□□□□□ -1.58
TOP1P11387 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TOP1P11387 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TOP1P11387 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TOP1P11387 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.18□□□□□ -1.58
TOP1P11387 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TOP1P11387 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms