Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
APOBP04114 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 AL391219.1-201ENST00000422570 483 ntBASIC2.54□□□□□ -2
APOBP04114 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC2.54□□□□□ -2
APOBP04114 AL136126.1-201ENST00000473603 402 ntBASIC2.54□□□□□ -2
APOBP04114 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC2.54□□□□□ -2
APOBP04114 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC2.54□□□□□ -2
APOBP04114 MIR6852-201ENST00000621699 66 ntBASIC2.54□□□□□ -2
APOBP04114 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.54□□□□□ -2
APOBP04114 GHR-202ENST00000357703 4316 ntTSL 5 BASIC2.54□□□□□ -2
APOBP04114 GHR-213ENST00000622294 4312 ntTSL 5 BASIC2.54□□□□□ -2
APOBP04114 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC2.54□□□□□ -2
APOBP04114 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 AL022323.4-201ENST00000623980 13120 ntBASIC2.54□□□□□ -2
APOBP04114 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC2.54□□□□□ -2
APOBP04114 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
APOBP04114 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
APOBP04114 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC2.54□□□□□ -2
APOBP04114 CBX1P3-201ENST00000413296 527 ntBASIC2.54□□□□□ -2
APOBP04114 AC108032.1-201ENST00000416706 207 ntBASIC2.54□□□□□ -2
APOBP04114 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC2.54□□□□□ -2
APOBP04114 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC2.54□□□□□ -2
APOBP04114 AP001486.1-201ENST00000463339 476 ntBASIC2.54□□□□□ -2
APOBP04114 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC2.54□□□□□ -2
APOBP04114 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.54□□□□□ -2
APOBP04114 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC2.54□□□□□ -2
APOBP04114 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC2.54□□□□□ -2
APOBP04114 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.54□□□□□ -2
APOBP04114 AC006960.3-201ENST00000561845 705 ntBASIC2.54□□□□□ -2
APOBP04114 AC091178.1-203ENST00000584586 279 ntBASIC2.54□□□□□ -2
APOBP04114 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC2.54□□□□□ -2
APOBP04114 AF001550.2-201ENST00000636643 217 ntBASIC2.54□□□□□ -2
APOBP04114 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC2.54□□□□□ -2
APOBP04114 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 HSFY4P-201ENST00000415994 1181 ntBASIC2.54□□□□□ -2
APOBP04114 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC2.54□□□□□ -2
APOBP04114 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.54□□□□□ -2
APOBP04114 RPL6P9-201ENST00000466502 859 ntBASIC2.54□□□□□ -2
APOBP04114 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 MIR3945-201ENST00000581853 98 ntBASIC2.54□□□□□ -2
APOBP04114 MIR5187-201ENST00000583479 76 ntBASIC2.54□□□□□ -2
APOBP04114 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC2.54□□□□□ -2
APOBP04114 AP002360.3-201ENST00000607673 710 ntBASIC2.54□□□□□ -2
APOBP04114 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.54□□□□□ -2
APOBP04114 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC2.54□□□□□ -2
APOBP04114 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.54□□□□□ -2
APOBP04114 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC2.54□□□□□ -2
APOBP04114 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC2.54□□□□□ -2
APOBP04114 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC2.54□□□□□ -2
APOBP04114 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC2.54□□□□□ -2
APOBP04114 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
APOBP04114 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC2.53□□□□□ -2
APOBP04114 AL136164.3-201ENST00000624429 3978 ntBASIC2.53□□□□□ -2
APOBP04114 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC2.53□□□□□ -2
APOBP04114 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
APOBP04114 MIR921-201ENST00000401133 56 ntBASIC2.53□□□□□ -2
APOBP04114 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.53□□□□□ -2
APOBP04114 MIR4513-201ENST00000581077 86 ntBASIC2.53□□□□□ -2
APOBP04114 AL159169.3-201ENST00000608871 561 ntBASIC2.53□□□□□ -2
APOBP04114 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC2.53□□□□□ -2
APOBP04114 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC2.53□□□□□ -2
APOBP04114 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
APOBP04114 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
APOBP04114 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
APOBP04114 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
APOBP04114 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
APOBP04114 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
APOBP04114 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC2.53□□□□□ -2
APOBP04114 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
APOBP04114 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.53□□□□□ -2
APOBP04114 RPS26P4-201ENST00000431743 355 ntBASIC2.53□□□□□ -2
APOBP04114 HSPD1P21-201ENST00000436541 245 ntBASIC2.53□□□□□ -2
APOBP04114 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.53□□□□□ -2
APOBP04114 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC2.53□□□□□ -2
APOBP04114 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.53□□□□□ -2
APOBP04114 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC2.53□□□□□ -2
APOBP04114 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC2.53□□□□□ -2
APOBP04114 AC079171.1-201ENST00000568788 914 ntBASIC2.53□□□□□ -2
APOBP04114 SCARNA15-201ENST00000607520 4325 ntBASIC2.53□□□□□ -2
APOBP04114 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
APOBP04114 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC2.53□□□□□ -2
APOBP04114 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC2.53□□□□□ -2
APOBP04114 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC2.53□□□□□ -2
APOBP04114 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms