Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MIR1911-201ENST00000410783 80 ntBASIC4.19□□□□□ -1.74
TNFP01375 RNA5SP311-201ENST00000411290 116 ntBASIC4.19□□□□□ -1.74
TNFP01375 AC108032.1-201ENST00000416706 207 ntBASIC4.19□□□□□ -1.74
TNFP01375 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.19□□□□□ -1.74
TNFP01375 AC012519.1-201ENST00000424588 610 ntBASIC4.19□□□□□ -1.74
TNFP01375 HSFY6P-201ENST00000445573 403 ntBASIC4.19□□□□□ -1.74
TNFP01375 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.19□□□□□ -1.74
TNFP01375 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TNFP01375 AC012158.1-204ENST00000483430 465 ntBASIC4.19□□□□□ -1.74
TNFP01375 RPS27AP13-201ENST00000498403 237 ntBASIC4.19□□□□□ -1.74
TNFP01375 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.19□□□□□ -1.74
TNFP01375 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.19□□□□□ -1.74
TNFP01375 RNA5SP315-201ENST00000516340 116 ntBASIC4.19□□□□□ -1.74
TNFP01375 RNA5SP312-201ENST00000517068 116 ntBASIC4.19□□□□□ -1.74
TNFP01375 AC084824.1-201ENST00000550917 1005 ntBASIC4.19□□□□□ -1.74
TNFP01375 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.19□□□□□ -1.74
TNFP01375 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.19□□□□□ -1.74
TNFP01375 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.19□□□□□ -1.74
TNFP01375 AC006116.5-201ENST00000591936 559 ntBASIC4.19□□□□□ -1.74
TNFP01375 AC024941.1-201ENST00000612250 334 ntBASIC4.19□□□□□ -1.74
TNFP01375 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.19□□□□□ -1.74
TNFP01375 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.19□□□□□ -1.74
TNFP01375 AL445363.3-201ENST00000623080 671 ntBASIC4.19□□□□□ -1.74
TNFP01375 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.19□□□□□ -1.74
TNFP01375 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.19□□□□□ -1.74
TNFP01375 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
TNFP01375 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
TNFP01375 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TNFP01375 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
TNFP01375 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TNFP01375 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.18□□□□□ -1.74
TNFP01375 AC092435.4-201ENST00000623012 4159 ntBASIC4.18□□□□□ -1.74
TNFP01375 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TNFP01375 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
TNFP01375 SPRR2C-201ENST00000290702 219 ntBASIC4.18□□□□□ -1.74
TNFP01375 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TNFP01375 RNU1-13P-201ENST00000384499 162 ntBASIC4.18□□□□□ -1.74
TNFP01375 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.18□□□□□ -1.74
TNFP01375 AL590806.1-201ENST00000415818 853 ntBASIC4.18□□□□□ -1.74
TNFP01375 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.18□□□□□ -1.74
TNFP01375 SETP10-201ENST00000424368 814 ntBASIC4.18□□□□□ -1.74
TNFP01375 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.18□□□□□ -1.74
TNFP01375 RPEP2-201ENST00000432149 701 ntBASIC4.18□□□□□ -1.74
TNFP01375 OR4C10P-201ENST00000434991 931 ntBASIC4.18□□□□□ -1.74
TNFP01375 RPL23AP46-201ENST00000438548 490 ntBASIC4.18□□□□□ -1.74
TNFP01375 AL591623.2-201ENST00000449978 222 ntBASIC4.18□□□□□ -1.74
TNFP01375 ATP5G1P3-201ENST00000463301 410 ntBASIC4.18□□□□□ -1.74
TNFP01375 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
TNFP01375 AC090013.1-201ENST00000485147 480 ntBASIC4.18□□□□□ -1.74
TNFP01375 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TNFP01375 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.18□□□□□ -1.74
TNFP01375 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
TNFP01375 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.18□□□□□ -1.74
TNFP01375 AGGF1P6-201ENST00000569213 976 ntBASIC4.18□□□□□ -1.74
TNFP01375 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TNFP01375 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.18□□□□□ -1.74
TNFP01375 AC007546.1-201ENST00000619452 559 ntBASIC4.18□□□□□ -1.74
TNFP01375 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.18□□□□□ -1.74
TNFP01375 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TNFP01375 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
TNFP01375 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
TNFP01375 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.18□□□□□ -1.74
TNFP01375 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.17□□□□□ -1.74
TNFP01375 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TNFP01375 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
TNFP01375 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TNFP01375 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.17□□□□□ -1.74
TNFP01375 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
TNFP01375 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
TNFP01375 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.17□□□□□ -1.74
TNFP01375 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.17□□□□□ -1.74
TNFP01375 MRPL50P1-201ENST00000431951 384 ntBASIC4.17□□□□□ -1.74
TNFP01375 EEF1A1P1-201ENST00000447052 739 ntBASIC4.17□□□□□ -1.74
TNFP01375 RPS27AP15-201ENST00000447672 466 ntBASIC4.17□□□□□ -1.74
TNFP01375 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.17□□□□□ -1.74
TNFP01375 AC134698.5-201ENST00000519444 336 ntBASIC4.17□□□□□ -1.74
TNFP01375 AC090151.1-201ENST00000520784 730 ntBASIC4.17□□□□□ -1.74
TNFP01375 AC105233.3-201ENST00000531125 744 ntBASIC4.17□□□□□ -1.74
TNFP01375 AC006064.5-201ENST00000541782 248 ntBASIC4.17□□□□□ -1.74
TNFP01375 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.17□□□□□ -1.74
TNFP01375 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.17□□□□□ -1.74
TNFP01375 RN7SL600P-201ENST00000581811 299 ntBASIC4.17□□□□□ -1.74
TNFP01375 AC022106.2-201ENST00000620114 757 ntBASIC4.17□□□□□ -1.74
TNFP01375 RNA5SP196-201ENST00000625967 102 ntBASIC4.17□□□□□ -1.74
TNFP01375 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.17□□□□□ -1.74
TNFP01375 AL449283.1-201ENST00000602631 3403 ntBASIC4.17□□□□□ -1.74
TNFP01375 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TNFP01375 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TNFP01375 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TNFP01375 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TNFP01375 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
TNFP01375 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.17□□□□□ -1.74
TNFP01375 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TNFP01375 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
TNFP01375 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.17□□□□□ -1.74
TNFP01375 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
TNFP01375 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.17□□□□□ -1.74
TNFP01375 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.17□□□□□ -1.74
TNFP01375 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.17□□□□□ -1.74
TNFP01375 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms