Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RBMY2KP-201ENST00000418221 992 ntBASIC7.69□□□□□ -1.18
RNF40O75150 AC009965.2-201ENST00000425328 970 ntBASIC7.69□□□□□ -1.18
RNF40O75150 GPR143P-201ENST00000434155 205 ntBASIC7.69□□□□□ -1.18
RNF40O75150 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF40O75150 RPS10P14-201ENST00000440748 502 ntBASIC7.69□□□□□ -1.18
RNF40O75150 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.69□□□□□ -1.18
RNF40O75150 GAPDHP14-201ENST00000450472 937 ntBASIC7.69□□□□□ -1.18
RNF40O75150 AC073476.1-201ENST00000452854 407 ntBASIC7.69□□□□□ -1.18
RNF40O75150 PFN1P6-201ENST00000476786 399 ntBASIC7.69□□□□□ -1.18
RNF40O75150 RPL32P9-201ENST00000487963 407 ntBASIC7.69□□□□□ -1.18
RNF40O75150 RPS4XP18-201ENST00000495480 763 ntBASIC7.69□□□□□ -1.18
RNF40O75150 OR4D12P-201ENST00000509361 911 ntBASIC7.69□□□□□ -1.18
RNF40O75150 IGHV3-63-201ENST00000518422 341 ntBASIC7.69□□□□□ -1.18
RNF40O75150 HMGB1P23-201ENST00000518743 568 ntBASIC7.69□□□□□ -1.18
RNF40O75150 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC7.69□□□□□ -1.18
RNF40O75150 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
RNF40O75150 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC7.69□□□□□ -1.18
RNF40O75150 AP002373.2-201ENST00000541631 1060 ntBASIC7.69□□□□□ -1.18
RNF40O75150 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC7.69□□□□□ -1.18
RNF40O75150 MTCO3P23-201ENST00000561363 289 ntBASIC7.69□□□□□ -1.18
RNF40O75150 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.69□□□□□ -1.18
RNF40O75150 AC138749.2-201ENST00000566048 167 ntBASIC7.69□□□□□ -1.18
RNF40O75150 RN7SL178P-201ENST00000582930 304 ntBASIC7.69□□□□□ -1.18
RNF40O75150 MIR6070-201ENST00000613967 103 ntBASIC7.69□□□□□ -1.18
RNF40O75150 AC138627.2-201ENST00000624202 601 ntBASIC7.69□□□□□ -1.18
RNF40O75150 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF40O75150 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.69□□□□□ -1.18
RNF40O75150 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF40O75150 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF40O75150 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.69□□□□□ -1.18
RNF40O75150 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF40O75150 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
RNF40O75150 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF40O75150 AP004289.2-201ENST00000444413 1457 ntBASIC7.68□□□□□ -1.18
RNF40O75150 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF40O75150 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF40O75150 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF40O75150 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF40O75150 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF40O75150 AC132219.2-201ENST00000624416 2327 ntBASIC7.68□□□□□ -1.18
RNF40O75150 AC090643.1-201ENST00000623600 3100 ntBASIC7.68□□□□□ -1.18
RNF40O75150 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF40O75150 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF40O75150 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF40O75150 CDY11P-201ENST00000447168 1651 ntBASIC7.68□□□□□ -1.18
RNF40O75150 NRK-204ENST00000540278 1687 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF40O75150 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF40O75150 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
RNF40O75150 RNU6-289P-201ENST00000364093 107 ntBASIC7.68□□□□□ -1.18
RNF40O75150 RNU6-730P-201ENST00000383954 104 ntBASIC7.68□□□□□ -1.18
RNF40O75150 MIR555-201ENST00000384987 96 ntBASIC7.68□□□□□ -1.18
RNF40O75150 AC090114.1-201ENST00000393266 448 ntBASIC7.68□□□□□ -1.18
RNF40O75150 SNORA2C-201ENST00000408564 137 ntBASIC7.68□□□□□ -1.18
RNF40O75150 RNA5SP177-201ENST00000410122 107 ntBASIC7.68□□□□□ -1.18
RNF40O75150 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC7.68□□□□□ -1.18
RNF40O75150 CYP4F34P-201ENST00000425951 481 ntBASIC7.68□□□□□ -1.18
RNF40O75150 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF40O75150 RPL23AP50-201ENST00000434149 455 ntBASIC7.68□□□□□ -1.18
RNF40O75150 HMGB3P10-201ENST00000434734 572 ntBASIC7.68□□□□□ -1.18
RNF40O75150 AL451074.4-201ENST00000447545 470 ntBASIC7.68□□□□□ -1.18
RNF40O75150 AC107399.1-201ENST00000451226 265 ntBASIC7.68□□□□□ -1.18
RNF40O75150 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF40O75150 RPLP0P1-201ENST00000457002 361 ntBASIC7.68□□□□□ -1.18
RNF40O75150 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF40O75150 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.68□□□□□ -1.18
RNF40O75150 Y_RNA.653-201ENST00000459091 95 ntBASIC7.68□□□□□ -1.18
RNF40O75150 AC015724.1-201ENST00000478577 156 ntBASIC7.68□□□□□ -1.18
RNF40O75150 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.68□□□□□ -1.18
RNF40O75150 AC008040.4-201ENST00000494834 768 ntBASIC7.68□□□□□ -1.18
RNF40O75150 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.68□□□□□ -1.18
RNF40O75150 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF40O75150 VN1R104P-201ENST00000505115 1009 ntBASIC7.68□□□□□ -1.18
RNF40O75150 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
RNF40O75150 AC233724.10-201ENST00000510454 409 ntBASIC7.68□□□□□ -1.18
RNF40O75150 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC7.68□□□□□ -1.18
RNF40O75150 Y_RNA.682-201ENST00000516457 100 ntBASIC7.68□□□□□ -1.18
RNF40O75150 RANP9-201ENST00000519957 271 ntBASIC7.68□□□□□ -1.18
RNF40O75150 RPL3P13-201ENST00000550415 216 ntBASIC7.68□□□□□ -1.18
RNF40O75150 FAM106CP-201ENST00000582212 507 ntBASIC7.68□□□□□ -1.18
RNF40O75150 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
RNF40O75150 CUX2P1-201ENST00000606426 298 ntBASIC7.68□□□□□ -1.18
RNF40O75150 AC100812.1-201ENST00000607622 580 ntBASIC7.68□□□□□ -1.18
RNF40O75150 AP001521.1-201ENST00000609150 300 ntBASIC7.68□□□□□ -1.18
RNF40O75150 AL355810.1-201ENST00000614629 552 ntBASIC7.68□□□□□ -1.18
RNF40O75150 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.68□□□□□ -1.18
RNF40O75150 uc_338.11-201ENST00000619132 160 ntBASIC7.68□□□□□ -1.18
RNF40O75150 AL122023.1-201ENST00000622847 530 ntBASIC7.68□□□□□ -1.18
RNF40O75150 SNX18P12-201ENST00000624821 759 ntBASIC7.68□□□□□ -1.18
RNF40O75150 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF40O75150 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF40O75150 MFF-206ENST00000392059 1710 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF40O75150 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF40O75150 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF40O75150 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF40O75150 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF40O75150 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF40O75150 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF40O75150 WBP11P1-201ENST00000562560 1931 ntBASIC7.68□□□□□ -1.18
RNF40O75150 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF40O75150 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms