Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC024595.1-201ENST00000623088 387 ntBASIC4.58□□□□□ -1.68
SSX4O60224 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.58□□□□□ -1.68
SSX4O60224 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.58□□□□□ -1.68
SSX4O60224 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSX4O60224 AC005332.5-201ENST00000591222 2919 ntBASIC4.58□□□□□ -1.68
SSX4O60224 SEC63P2-201ENST00000503863 1939 ntBASIC4.58□□□□□ -1.68
SSX4O60224 BX005019.1-201ENST00000561881 1810 ntBASIC4.58□□□□□ -1.68
SSX4O60224 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSX4O60224 AP000542.2-201ENST00000623199 6179 ntBASIC4.58□□□□□ -1.68
SSX4O60224 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSX4O60224 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSX4O60224 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.57□□□□□ -1.68
SSX4O60224 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX4O60224 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX4O60224 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SSX4O60224 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.57□□□□□ -1.68
SSX4O60224 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SSX4O60224 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SSX4O60224 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.57□□□□□ -1.68
SSX4O60224 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SSX4O60224 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSX4O60224 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX4O60224 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
SSX4O60224 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SSX4O60224 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSX4O60224 RN7SKP115-201ENST00000363177 317 ntBASIC4.57□□□□□ -1.68
SSX4O60224 RNU5B-1-201ENST00000363286 116 ntBASIC4.57□□□□□ -1.68
SSX4O60224 SNORD65C-201ENST00000390962 71 ntBASIC4.57□□□□□ -1.68
SSX4O60224 U3.36-201ENST00000408418 213 ntBASIC4.57□□□□□ -1.68
SSX4O60224 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX4O60224 RN7SKP126-201ENST00000411143 300 ntBASIC4.57□□□□□ -1.68
SSX4O60224 MTND4P11-201ENST00000417020 1058 ntBASIC4.57□□□□□ -1.68
SSX4O60224 RPS24P8-201ENST00000431490 402 ntBASIC4.57□□□□□ -1.68
SSX4O60224 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX4O60224 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX4O60224 ARF4P4-201ENST00000439608 520 ntBASIC4.57□□□□□ -1.68
SSX4O60224 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX4O60224 AL672138.1-201ENST00000450604 1015 ntBASIC4.57□□□□□ -1.68
SSX4O60224 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSX4O60224 AL356981.1-201ENST00000454879 684 ntBASIC4.57□□□□□ -1.68
SSX4O60224 AL445433.1-201ENST00000457507 257 ntBASIC4.57□□□□□ -1.68
SSX4O60224 RNU6-1218P-201ENST00000458990 108 ntBASIC4.57□□□□□ -1.68
SSX4O60224 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX4O60224 RPS4XP6-201ENST00000477670 797 ntBASIC4.57□□□□□ -1.68
SSX4O60224 RPL7P41-201ENST00000485823 957 ntBASIC4.57□□□□□ -1.68
SSX4O60224 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX4O60224 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.57□□□□□ -1.68
SSX4O60224 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SSX4O60224 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.57□□□□□ -1.68
SSX4O60224 OR1F2P-201ENST00000570470 933 ntBASIC4.57□□□□□ -1.68
SSX4O60224 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SSX4O60224 AP002906.1-201ENST00000603405 233 ntBASIC4.57□□□□□ -1.68
SSX4O60224 AP002802.2-201ENST00000605877 235 ntBASIC4.57□□□□□ -1.68
SSX4O60224 AL008729.2-201ENST00000606393 473 ntBASIC4.57□□□□□ -1.68
SSX4O60224 AC100827.5-201ENST00000615883 426 ntBASIC4.57□□□□□ -1.68
SSX4O60224 U6.48-201ENST00000618523 106 ntBASIC4.57□□□□□ -1.68
SSX4O60224 AC022079.2-201ENST00000619739 566 ntBASIC4.57□□□□□ -1.68
SSX4O60224 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX4O60224 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.57□□□□□ -1.68
SSX4O60224 AC099654.9-201ENST00000637055 678 ntBASIC4.57□□□□□ -1.68
SSX4O60224 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSX4O60224 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSX4O60224 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX4O60224 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX4O60224 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SSX4O60224 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX4O60224 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSX4O60224 AC006042.3-201ENST00000454684 1469 ntBASIC4.56□□□□□ -1.68
SSX4O60224 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSX4O60224 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSX4O60224 AC096656.1-201ENST00000623826 1364 ntBASIC4.56□□□□□ -1.68
SSX4O60224 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.56□□□□□ -1.68
SSX4O60224 LINC01109-201ENST00000603837 3081 ntBASIC4.56□□□□□ -1.68
SSX4O60224 SCARNA15-201ENST00000607520 4325 ntBASIC4.56□□□□□ -1.68
SSX4O60224 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.56□□□□□ -1.68
SSX4O60224 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.56□□□□□ -1.68
SSX4O60224 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSX4O60224 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSX4O60224 MIR105-1-201ENST00000385222 81 ntBASIC4.56□□□□□ -1.68
SSX4O60224 RNU6-932P-201ENST00000391108 106 ntBASIC4.56□□□□□ -1.68
SSX4O60224 DBIP1-201ENST00000401435 260 ntBASIC4.56□□□□□ -1.68
SSX4O60224 OR4K12P-201ENST00000406538 961 ntBASIC4.56□□□□□ -1.68
SSX4O60224 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.56□□□□□ -1.68
SSX4O60224 MIR1303-201ENST00000408625 86 ntBASIC4.56□□□□□ -1.68
SSX4O60224 Y_RNA.625-201ENST00000411256 107 ntBASIC4.56□□□□□ -1.68
SSX4O60224 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.56□□□□□ -1.68
SSX4O60224 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.56□□□□□ -1.68
SSX4O60224 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.56□□□□□ -1.68
SSX4O60224 HSFY1P1-201ENST00000423928 1178 ntBASIC4.56□□□□□ -1.68
SSX4O60224 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSX4O60224 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.56□□□□□ -1.68
SSX4O60224 AL031663.1-201ENST00000437445 219 ntBASIC4.56□□□□□ -1.68
SSX4O60224 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.56□□□□□ -1.68
SSX4O60224 MTND6P18-201ENST00000439477 513 ntBASIC4.56□□□□□ -1.68
SSX4O60224 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.56□□□□□ -1.68
SSX4O60224 AC092647.3-201ENST00000443044 633 ntBASIC4.56□□□□□ -1.68
SSX4O60224 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.56□□□□□ -1.68
SSX4O60224 AC068135.1-201ENST00000446164 246 ntBASIC4.56□□□□□ -1.68
SSX4O60224 MRPL35P2-201ENST00000448009 511 ntBASIC4.56□□□□□ -1.68
SSX4O60224 AL935212.3-201ENST00000450729 284 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms