Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 DPPA2P3-201ENST00000411853 655 ntBASIC4.42□□□□□ -1.7
LSM1O15116 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.42□□□□□ -1.7
LSM1O15116 AL590806.1-201ENST00000415818 853 ntBASIC4.42□□□□□ -1.7
LSM1O15116 CYP1D1P-201ENST00000416662 1433 ntBASIC4.42□□□□□ -1.7
LSM1O15116 AC140479.3-201ENST00000418944 1126 ntBASIC4.42□□□□□ -1.7
LSM1O15116 AC093698.1-201ENST00000423843 571 ntBASIC4.42□□□□□ -1.7
LSM1O15116 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.42□□□□□ -1.7
LSM1O15116 RPL12P28-201ENST00000430852 489 ntBASIC4.42□□□□□ -1.7
LSM1O15116 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.42□□□□□ -1.7
LSM1O15116 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.42□□□□□ -1.7
LSM1O15116 ISCUP1-201ENST00000454451 448 ntBASIC4.42□□□□□ -1.7
LSM1O15116 PPIAP21-201ENST00000464473 501 ntBASIC4.42□□□□□ -1.7
LSM1O15116 RN7SL205P-201ENST00000490174 284 ntBASIC4.42□□□□□ -1.7
LSM1O15116 AC010627.1-201ENST00000503819 1294 ntBASIC4.42□□□□□ -1.7
LSM1O15116 AC117525.1-201ENST00000515228 503 ntBASIC4.42□□□□□ -1.7
LSM1O15116 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.42□□□□□ -1.7
LSM1O15116 SEC11B-201ENST00000518383 499 ntBASIC4.42□□□□□ -1.7
LSM1O15116 AC090151.1-201ENST00000520784 730 ntBASIC4.42□□□□□ -1.7
LSM1O15116 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.42□□□□□ -1.7
LSM1O15116 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.42□□□□□ -1.7
LSM1O15116 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LSM1O15116 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.42□□□□□ -1.7
LSM1O15116 AP001880.2-201ENST00000538233 448 ntBASIC4.42□□□□□ -1.7
LSM1O15116 AC084033.1-201ENST00000550830 633 ntBASIC4.42□□□□□ -1.7
LSM1O15116 HMGN2P6-201ENST00000551091 273 ntBASIC4.42□□□□□ -1.7
LSM1O15116 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LSM1O15116 BGLT3-201ENST00000564523 994 ntBASIC4.42□□□□□ -1.7
LSM1O15116 AL121834.1-201ENST00000572284 509 ntBASIC4.42□□□□□ -1.7
LSM1O15116 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.42□□□□□ -1.7
LSM1O15116 MIR4644-201ENST00000579929 84 ntBASIC4.42□□□□□ -1.7
LSM1O15116 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.42□□□□□ -1.7
LSM1O15116 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.42□□□□□ -1.7
LSM1O15116 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.42□□□□□ -1.7
LSM1O15116 AL512624.1-201ENST00000613638 469 ntBASIC4.42□□□□□ -1.7
LSM1O15116 AL353726.1-201ENST00000614041 1000 ntBASIC4.42□□□□□ -1.7
LSM1O15116 AL133370.2-201ENST00000619934 439 ntBASIC4.42□□□□□ -1.7
LSM1O15116 AC103858.2-201ENST00000621471 543 ntBASIC4.42□□□□□ -1.7
LSM1O15116 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.42□□□□□ -1.7
LSM1O15116 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LSM1O15116 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
LSM1O15116 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LSM1O15116 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LSM1O15116 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LSM1O15116 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LSM1O15116 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LSM1O15116 AL592437.2-201ENST00000421655 2434 ntBASIC4.41□□□□□ -1.7
LSM1O15116 AL049555.1-201ENST00000562834 1933 ntBASIC4.41□□□□□ -1.7
LSM1O15116 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LSM1O15116 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LSM1O15116 SNORD65-201ENST00000391079 73 ntBASIC4.41□□□□□ -1.7
LSM1O15116 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LSM1O15116 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LSM1O15116 AMD1P2-201ENST00000412936 992 ntBASIC4.41□□□□□ -1.7
LSM1O15116 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.41□□□□□ -1.7
LSM1O15116 RPL23AP27-201ENST00000415161 451 ntBASIC4.41□□□□□ -1.7
LSM1O15116 GTF3AP1-201ENST00000416942 1004 ntBASIC4.41□□□□□ -1.7
LSM1O15116 RPA2P2-201ENST00000419698 796 ntBASIC4.41□□□□□ -1.7
LSM1O15116 AC004074.1-201ENST00000421810 1063 ntBASIC4.41□□□□□ -1.7
LSM1O15116 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.41□□□□□ -1.7
LSM1O15116 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.41□□□□□ -1.7
LSM1O15116 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.41□□□□□ -1.7
LSM1O15116 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.41□□□□□ -1.7
LSM1O15116 OR1H1P-201ENST00000448731 937 ntBASIC4.41□□□□□ -1.7
LSM1O15116 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.41□□□□□ -1.7
LSM1O15116 AC092045.1-201ENST00000495716 1231 ntBASIC4.41□□□□□ -1.7
LSM1O15116 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.41□□□□□ -1.7
LSM1O15116 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.41□□□□□ -1.7
LSM1O15116 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.41□□□□□ -1.7
LSM1O15116 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.41□□□□□ -1.7
LSM1O15116 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LSM1O15116 AL110118.1-201ENST00000553543 400 ntBASIC4.41□□□□□ -1.7
LSM1O15116 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.41□□□□□ -1.7
LSM1O15116 AC068714.1-201ENST00000559623 800 ntBASIC4.41□□□□□ -1.7
LSM1O15116 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.41□□□□□ -1.7
LSM1O15116 AC009117.1-201ENST00000563948 554 ntBASIC4.41□□□□□ -1.7
LSM1O15116 AC009101.1-201ENST00000568135 242 ntBASIC4.41□□□□□ -1.7
LSM1O15116 NPM1P45-201ENST00000583151 559 ntBASIC4.41□□□□□ -1.7
LSM1O15116 AP002360.3-201ENST00000607673 710 ntBASIC4.41□□□□□ -1.7
LSM1O15116 uc_338.32-201ENST00000615087 172 ntBASIC4.41□□□□□ -1.7
LSM1O15116 AC087385.3-201ENST00000620477 187 ntBASIC4.41□□□□□ -1.7
LSM1O15116 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
LSM1O15116 CR788268.1-201ENST00000603931 1809 ntBASIC4.41□□□□□ -1.7
LSM1O15116 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
LSM1O15116 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LSM1O15116 CIR1P2-201ENST00000514821 1342 ntBASIC4.41□□□□□ -1.7
LSM1O15116 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.41□□□□□ -1.7
LSM1O15116 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
LSM1O15116 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LSM1O15116 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
LSM1O15116 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
LSM1O15116 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LSM1O15116 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.4□□□□□ -1.71
LSM1O15116 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LSM1O15116 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LSM1O15116 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.4□□□□□ -1.71
LSM1O15116 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LSM1O15116 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.4□□□□□ -1.71
LSM1O15116 RNA5SP113-201ENST00000410486 84 ntBASIC4.4□□□□□ -1.71
LSM1O15116 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.4□□□□□ -1.71
LSM1O15116 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms