Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
FOXN3O00409 AC009313.2-201ENST00000417893 1941 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
FOXN3O00409 RNU1-43P-201ENST00000365052 165 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
FOXN3O00409 TAS2R15P-201ENST00000390674 928 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 MTCO1P56-201ENST00000401674 224 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.51□□□□□ -1.53
FOXN3O00409 RNU6-77P-201ENST00000410554 91 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 RN7SKP206-201ENST00000410823 293 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.51□□□□□ -1.53
FOXN3O00409 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
FOXN3O00409 AC092447.3-201ENST00000426027 686 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 PPIAP13-201ENST00000434706 478 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 PTMAP3-201ENST00000447474 330 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 AL589880.1-201ENST00000448271 287 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 RPS21P4-201ENST00000487122 248 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 ENPP7P11-201ENST00000505915 627 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 AC098799.3-201ENST00000506095 438 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.51□□□□□ -1.53
FOXN3O00409 PRELID3BP5-201ENST00000508612 460 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.51□□□□□ -1.53
FOXN3O00409 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.51□□□□□ -1.53
FOXN3O00409 AL049779.2-201ENST00000553847 315 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.51□□□□□ -1.53
FOXN3O00409 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.51□□□□□ -1.53
FOXN3O00409 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.51□□□□□ -1.53
FOXN3O00409 MTND3P13-201ENST00000574391 343 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 AC012146.2-201ENST00000576545 416 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.51□□□□□ -1.53
FOXN3O00409 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.51□□□□□ -1.53
FOXN3O00409 AC011445.2-201ENST00000599274 173 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 MTND3P19-201ENST00000603825 345 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 AL445423.1-201ENST00000609941 536 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 RPSAP73-201ENST00000614820 330 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.51□□□□□ -1.53
FOXN3O00409 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
FOXN3O00409 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
FOXN3O00409 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FOXN3O00409 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FOXN3O00409 AC096656.1-201ENST00000623826 1364 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FOXN3O00409 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
FOXN3O00409 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
FOXN3O00409 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
FOXN3O00409 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
FOXN3O00409 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
FOXN3O00409 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
FOXN3O00409 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.5□□□□□ -1.53
FOXN3O00409 AC104118.1-201ENST00000607625 1589 ntBASIC5.5□□□□□ -1.53
FOXN3O00409 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
FOXN3O00409 CASC19-206ENST00000641028 1430 ntBASIC5.5□□□□□ -1.53
FOXN3O00409 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
FOXN3O00409 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
FOXN3O00409 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
FOXN3O00409 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.5□□□□□ -1.53
FOXN3O00409 MIR92A2-201ENST00000385299 75 ntBASIC5.5□□□□□ -1.53
FOXN3O00409 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.5□□□□□ -1.53
FOXN3O00409 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.5□□□□□ -1.53
FOXN3O00409 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.5□□□□□ -1.53
FOXN3O00409 AL139148.1-201ENST00000427122 680 ntBASIC5.5□□□□□ -1.53
FOXN3O00409 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.5□□□□□ -1.53
FOXN3O00409 OR52B5P-201ENST00000435337 951 ntBASIC5.5□□□□□ -1.53
FOXN3O00409 RPS6P2-201ENST00000454208 705 ntBASIC5.5□□□□□ -1.53
FOXN3O00409 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.5□□□□□ -1.53
FOXN3O00409 NAP1L1P3-201ENST00000462291 880 ntBASIC5.5□□□□□ -1.53
FOXN3O00409 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.5□□□□□ -1.53
FOXN3O00409 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.5□□□□□ -1.53
FOXN3O00409 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.5□□□□□ -1.53
FOXN3O00409 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.5□□□□□ -1.53
FOXN3O00409 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.5□□□□□ -1.53
FOXN3O00409 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.5□□□□□ -1.53
FOXN3O00409 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.5□□□□□ -1.53
FOXN3O00409 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.5□□□□□ -1.53
FOXN3O00409 AC023509.5-201ENST00000617434 807 ntBASIC5.5□□□□□ -1.53
FOXN3O00409 AL121895.2-201ENST00000619558 447 ntBASIC5.5□□□□□ -1.53
FOXN3O00409 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.5□□□□□ -1.53
FOXN3O00409 AC015908.5-201ENST00000623289 343 ntBASIC5.5□□□□□ -1.53
FOXN3O00409 OR52B5P-202ENST00000641118 1110 ntBASIC5.5□□□□□ -1.53
FOXN3O00409 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
FOXN3O00409 MTCO1P6-201ENST00000481192 1384 ntBASIC5.5□□□□□ -1.53
FOXN3O00409 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
FOXN3O00409 AC006042.3-201ENST00000454684 1469 ntBASIC5.5□□□□□ -1.53
FOXN3O00409 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
FOXN3O00409 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
FOXN3O00409 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
FOXN3O00409 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.5□□□□□ -1.53
FOXN3O00409 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
FOXN3O00409 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
FOXN3O00409 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.49□□□□□ -1.53
FOXN3O00409 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
FOXN3O00409 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
FOXN3O00409 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
FOXN3O00409 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
FOXN3O00409 PANDAR-201ENST00000629595 1506 ntBASIC5.49□□□□□ -1.53
FOXN3O00409 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
FOXN3O00409 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
FOXN3O00409 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
FOXN3O00409 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms