Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.94□□□□□ -1.62
O00370 RNU1-20P-201ENST00000363314 162 ntBASIC4.94□□□□□ -1.62
O00370 RNA5SP28-201ENST00000363841 119 ntBASIC4.94□□□□□ -1.62
O00370 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.94□□□□□ -1.62
O00370 RNU6-225P-201ENST00000384613 103 ntBASIC4.94□□□□□ -1.62
O00370 VDAC1P9-201ENST00000412766 841 ntBASIC4.94□□□□□ -1.62
O00370 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.94□□□□□ -1.62
O00370 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.94□□□□□ -1.62
O00370 EIF4EP1-201ENST00000422311 642 ntBASIC4.94□□□□□ -1.62
O00370 AC099336.2-201ENST00000422457 254 ntBASIC4.94□□□□□ -1.62
O00370 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
O00370 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.94□□□□□ -1.62
O00370 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.94□□□□□ -1.62
O00370 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.94□□□□□ -1.62
O00370 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.94□□□□□ -1.62
O00370 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.94□□□□□ -1.62
O00370 AC099560.2-201ENST00000457554 255 ntBASIC4.94□□□□□ -1.62
O00370 EIF2S2P5-201ENST00000457635 968 ntBASIC4.94□□□□□ -1.62
O00370 EIF2S2P4-201ENST00000461070 984 ntBASIC4.94□□□□□ -1.62
O00370 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
O00370 RPS4XP18-201ENST00000495480 763 ntBASIC4.94□□□□□ -1.62
O00370 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
O00370 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
O00370 AC108471.1-201ENST00000513977 287 ntBASIC4.94□□□□□ -1.62
O00370 HMGB1P46-201ENST00000520062 610 ntBASIC4.94□□□□□ -1.62
O00370 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
O00370 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.94□□□□□ -1.62
O00370 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
O00370 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.94□□□□□ -1.62
O00370 RN7SL690P-201ENST00000582087 240 ntBASIC4.94□□□□□ -1.62
O00370 AC209154.1-201ENST00000582156 337 ntBASIC4.94□□□□□ -1.62
O00370 AL158211.2-201ENST00000607282 395 ntBASIC4.94□□□□□ -1.62
O00370 AL355802.4-201ENST00000607635 548 ntBASIC4.94□□□□□ -1.62
O00370 AC092574.1-201ENST00000609771 420 ntBASIC4.94□□□□□ -1.62
O00370 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
O00370 AL109620.1-201ENST00000618738 1197 ntBASIC4.94□□□□□ -1.62
O00370 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.94□□□□□ -1.62
O00370 OR51H2P-202ENST00000641424 3046 ntBASIC4.94□□□□□ -1.62
O00370 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
O00370 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
O00370 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
O00370 AC135352.1-201ENST00000506173 1418 ntBASIC4.94□□□□□ -1.62
O00370 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.94□□□□□ -1.62
O00370 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
O00370 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
O00370 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.94□□□□□ -1.62
O00370 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
O00370 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
O00370 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
O00370 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
O00370 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
O00370 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
O00370 AC011155.1-201ENST00000316512 456 ntBASIC4.93□□□□□ -1.62
O00370 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
O00370 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
O00370 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
O00370 MIR298-201ENST00000401212 88 ntBASIC4.93□□□□□ -1.62
O00370 GSTA12P-201ENST00000402398 508 ntBASIC4.93□□□□□ -1.62
O00370 HDGFP1-201ENST00000405943 252 ntBASIC4.93□□□□□ -1.62
O00370 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
O00370 PDSS1P1-201ENST00000422953 1114 ntBASIC4.93□□□□□ -1.62
O00370 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.93□□□□□ -1.62
O00370 AC007563.3-201ENST00000433233 371 ntBASIC4.93□□□□□ -1.62
O00370 PPIAP13-201ENST00000434706 478 ntBASIC4.93□□□□□ -1.62
O00370 AL772161.1-201ENST00000439130 476 ntBASIC4.93□□□□□ -1.62
O00370 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.93□□□□□ -1.62
O00370 MTND5P8-201ENST00000449817 1083 ntBASIC4.93□□□□□ -1.62
O00370 EIF4A1P11-201ENST00000451239 222 ntBASIC4.93□□□□□ -1.62
O00370 AC010326.1-201ENST00000462726 602 ntBASIC4.93□□□□□ -1.62
O00370 RPL5P13-201ENST00000462840 709 ntBASIC4.93□□□□□ -1.62
O00370 RPL12P20-201ENST00000475538 479 ntBASIC4.93□□□□□ -1.62
O00370 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.93□□□□□ -1.62
O00370 MTCO1P31-201ENST00000506355 492 ntBASIC4.93□□□□□ -1.62
O00370 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.93□□□□□ -1.62
O00370 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.93□□□□□ -1.62
O00370 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.93□□□□□ -1.62
O00370 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.93□□□□□ -1.62
O00370 AC024341.1-201ENST00000526444 1552 ntBASIC4.93□□□□□ -1.62
O00370 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.93□□□□□ -1.62
O00370 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.93□□□□□ -1.62
O00370 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.93□□□□□ -1.62
O00370 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.93□□□□□ -1.62
O00370 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.93□□□□□ -1.62
O00370 RPL26P30-202ENST00000602923 645 ntBASIC4.93□□□□□ -1.62
O00370 AC123786.2-201ENST00000603459 275 ntBASIC4.93□□□□□ -1.62
O00370 AL008729.2-201ENST00000606393 473 ntBASIC4.93□□□□□ -1.62
O00370 AC026979.4-201ENST00000606555 645 ntBASIC4.93□□□□□ -1.62
O00370 AC116651.1-201ENST00000609724 556 ntBASIC4.93□□□□□ -1.62
O00370 MIR6780A-201ENST00000615089 68 ntBASIC4.93□□□□□ -1.62
O00370 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.93□□□□□ -1.62
O00370 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.93□□□□□ -1.62
O00370 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
O00370 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
O00370 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
O00370 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
O00370 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
O00370 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
O00370 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
O00370 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
O00370 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms