Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 AC010300.1-201ENST00000600671 5134 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 RNU1-14P-201ENST00000362759 152 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 RNA5SP306-201ENST00000411087 107 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 RPL6P29-201ENST00000414863 865 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 AC004552.1-201ENST00000419089 348 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 AC013470.3-201ENST00000420252 1194 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 RPS3AP54-201ENST00000435535 734 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 RPS26P3-201ENST00000470205 348 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 AC090543.2-201ENST00000483963 348 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 AC004057.1-201ENST00000485827 348 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 AF213884.1-201ENST00000488102 463 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 RN7SL810P-201ENST00000493031 276 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 AC025445.1-201ENST00000502728 300 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 OR51K1P-201ENST00000510214 950 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 RNA5SP73-201ENST00000516744 108 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 IGHV3-63-201ENST00000518422 341 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 AC022882.1-201ENST00000532142 501 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 OR5AN2P-201ENST00000534535 896 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 AL139395.1-201ENST00000603662 160 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 AL133406.3-201ENST00000606817 541 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 AC095038.2-201ENST00000621464 1070 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 NOL8P1-201ENST00000508336 3529 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 HSPD1P11-201ENST00000508643 1702 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 AC092111.2-201ENST00000611627 1414 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
TRAV27A0A087WT01 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 AC092162.3-201ENST00000624511 1624 ntBASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 AL672167.2-201ENST00000377164 879 ntBASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 SNORA37-201ENST00000384504 129 ntBASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 AL121834.1-202ENST00000404494 277 ntBASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 RBMY2KP-201ENST00000418221 992 ntBASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 AC092570.3-201ENST00000420113 693 ntBASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 AL034379.1-201ENST00000423216 253 ntBASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 NANOGP6-201ENST00000429190 847 ntBASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 RPL12P28-201ENST00000430852 489 ntBASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 LYPLA1P1-201ENST00000434514 622 ntBASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 AC013410.1-201ENST00000436223 1232 ntBASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 RPL23AP24-201ENST00000458203 385 ntBASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 AL592156.1-201ENST00000508758 304 ntBASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 RNA5SP49-201ENST00000516450 115 ntBASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 AC107918.3-201ENST00000533272 382 ntBASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 AC068831.4-201ENST00000556118 109 ntBASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 MIR4715-201ENST00000584117 79 ntBASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 AL035461.2-201ENST00000619201 524 ntBASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 KPNA2P2-201ENST00000419546 1489 ntBASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 MFSD8-216ENST00000641147 4009 ntBASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TRAV27A0A087WT01 NR1H5P-201ENST00000452683 1377 ntBASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 MTCO1P22-201ENST00000604619 1360 ntBASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms