Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 AC108022.1-201ENST00000493466 478 ntBASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 AK3P4-201ENST00000504283 583 ntBASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 AC111000.3-201ENST00000508057 576 ntBASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 STMN1P2-201ENST00000508435 439 ntBASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 FAM106CP-201ENST00000582212 507 ntBASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 AC069061.3-201ENST00000582254 823 ntBASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 BPIFA4P-203ENST00000603168 689 ntBASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 AL008729.2-201ENST00000606393 473 ntBASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 AC026979.4-201ENST00000606555 645 ntBASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 AL133243.1-201ENST00000614487 366 ntBASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 LINC00622-201ENST00000562811 1570 ntBASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CTNNA3Q9UI47 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 CPHL1P-201ENST00000461341 3407 ntBASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 RN7SKP27-201ENST00000410684 333 ntBASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 RPS27AP7-201ENST00000422792 455 ntBASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 RPL23AP25-201ENST00000430973 463 ntBASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 RPL23AP93-201ENST00000440847 484 ntBASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 AC091153.1-201ENST00000466297 402 ntBASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 NPM1P52-201ENST00000518264 846 ntBASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 AP000827.1-201ENST00000527814 258 ntBASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 AP001781.1-201ENST00000530977 207 ntBASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 RPL21P7-201ENST00000557463 483 ntBASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 AC091905.2-201ENST00000623143 306 ntBASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 AL049536.1-201ENST00000625043 744 ntBASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 LINC01808-202ENST00000641680 1116 ntBASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 AC091046.3-201ENST00000631455 1574 ntBASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.41□□□□□ -1.54
CTNNA3Q9UI47 MFSD8-220ENST00000641243 1422 ntBASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 RNA5SP372-201ENST00000390836 115 ntBASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 UQCRBP1-201ENST00000421129 336 ntBASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 OR2X1P-201ENST00000421144 687 ntBASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 AC004448.2-201ENST00000422360 586 ntBASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 RPS12P10-201ENST00000427031 377 ntBASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 AC099063.2-201ENST00000446360 662 ntBASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 AC109635.6-201ENST00000525487 1113 ntBASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 CYCSP28-201ENST00000534284 321 ntBASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 AC020910.2-201ENST00000603635 610 ntBASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 AC100847.1-201ENST00000611316 481 ntBASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 AC140113.4-201ENST00000622087 222 ntBASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 AC009950.2-201ENST00000636548 183 ntBASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CTNNA3Q9UI47 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CTNNA3Q9UI47 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CTNNA3Q9UI47 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.4□□□□□ -1.55
CTNNA3Q9UI47 AC233968.1-201ENST00000611212 1300 ntBASIC5.4□□□□□ -1.55
CTNNA3Q9UI47 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CTNNA3Q9UI47 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CTNNA3Q9UI47 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.4□□□□□ -1.55
CTNNA3Q9UI47 AP001002.1-201ENST00000625148 1513 ntBASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 EOGT-210ENST00000615922 1931 ntBASIC5.39□□□□□ -1.55
CTNNA3Q9UI47 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms