Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 FTLP19-201ENST00000433300 394 ntBASIC4.12□□□□□ -1.75
CCDC88CQ9P219 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 GEMIN8P3-201ENST00000445417 720 ntBASIC4.12□□□□□ -1.75
CCDC88CQ9P219 AC104164.2-201ENST00000496953 495 ntBASIC4.12□□□□□ -1.75
CCDC88CQ9P219 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 AC023575.1-201ENST00000580510 358 ntBASIC4.12□□□□□ -1.75
CCDC88CQ9P219 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 AC023509.5-201ENST00000617434 807 ntBASIC4.12□□□□□ -1.75
CCDC88CQ9P219 RNA5SP196-201ENST00000625967 102 ntBASIC4.12□□□□□ -1.75
CCDC88CQ9P219 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 SDHCP2-201ENST00000398565 501 ntBASIC4.12□□□□□ -1.75
CCDC88CQ9P219 AL078604.1-201ENST00000404609 466 ntBASIC4.12□□□□□ -1.75
CCDC88CQ9P219 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 ARAFP1-201ENST00000422172 605 ntBASIC4.12□□□□□ -1.75
CCDC88CQ9P219 AL132765.1-201ENST00000434165 553 ntBASIC4.12□□□□□ -1.75
CCDC88CQ9P219 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 MRPL49P2-201ENST00000521066 465 ntBASIC4.12□□□□□ -1.75
CCDC88CQ9P219 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 OR10D4P-201ENST00000525892 951 ntBASIC4.12□□□□□ -1.75
CCDC88CQ9P219 PHBP17-201ENST00000528576 541 ntBASIC4.12□□□□□ -1.75
CCDC88CQ9P219 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 KPNA2P3-201ENST00000584190 848 ntBASIC4.12□□□□□ -1.75
CCDC88CQ9P219 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.12□□□□□ -1.75
CCDC88CQ9P219 AC104662.1-201ENST00000604448 511 ntBASIC4.12□□□□□ -1.75
CCDC88CQ9P219 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC88CQ9P219 HCFC2P1-201ENST00000392864 1592 ntBASIC4.11□□□□□ -1.75
CCDC88CQ9P219 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC88CQ9P219 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC88CQ9P219 SNORA70.2-201ENST00000364506 135 ntBASIC4.11□□□□□ -1.75
CCDC88CQ9P219 RN7SKP33-201ENST00000410942 340 ntBASIC4.11□□□□□ -1.75
CCDC88CQ9P219 RPS23P10-201ENST00000416185 486 ntBASIC4.11□□□□□ -1.75
CCDC88CQ9P219 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC88CQ9P219 RPL36AP13-201ENST00000457490 317 ntBASIC4.11□□□□□ -1.75
CCDC88CQ9P219 AC022795.1-201ENST00000473808 480 ntBASIC4.11□□□□□ -1.75
CCDC88CQ9P219 PPBPP1-201ENST00000510807 373 ntBASIC4.11□□□□□ -1.75
CCDC88CQ9P219 HMGB1P19-201ENST00000517578 577 ntBASIC4.11□□□□□ -1.75
CCDC88CQ9P219 AP000827.1-201ENST00000527814 258 ntBASIC4.11□□□□□ -1.75
CCDC88CQ9P219 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC88CQ9P219 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC88CQ9P219 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC88CQ9P219 AC010547.7-201ENST00000570323 333 ntBASIC4.11□□□□□ -1.75
CCDC88CQ9P219 AL445567.2-201ENST00000618935 498 ntBASIC4.11□□□□□ -1.75
CCDC88CQ9P219 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC88CQ9P219 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC88CQ9P219 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC88CQ9P219 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC88CQ9P219 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC88CQ9P219 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC88CQ9P219 RPL23AP26-201ENST00000412728 464 ntBASIC4.11□□□□□ -1.75
CCDC88CQ9P219 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC88CQ9P219 RN7SL604P-201ENST00000492589 296 ntBASIC4.11□□□□□ -1.75
CCDC88CQ9P219 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC88CQ9P219 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC88CQ9P219 MTCO1P35-201ENST00000515270 228 ntBASIC4.11□□□□□ -1.75
CCDC88CQ9P219 RNA5SP49-201ENST00000516450 115 ntBASIC4.11□□□□□ -1.75
CCDC88CQ9P219 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.11□□□□□ -1.75
CCDC88CQ9P219 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC88CQ9P219 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC88CQ9P219 AL138721.1-201ENST00000616756 179 ntBASIC4.11□□□□□ -1.75
CCDC88CQ9P219 uc_338.13-201ENST00000618243 179 ntBASIC4.11□□□□□ -1.75
CCDC88CQ9P219 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 AC105074.1-201ENST00000623380 3095 ntBASIC4.1□□□□□ -1.75
CCDC88CQ9P219 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 RPS24P12-201ENST00000402084 394 ntBASIC4.1□□□□□ -1.75
CCDC88CQ9P219 NDUFA5P1-201ENST00000433858 341 ntBASIC4.1□□□□□ -1.75
CCDC88CQ9P219 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 MTCYBP21-201ENST00000443300 1113 ntBASIC4.1□□□□□ -1.75
CCDC88CQ9P219 EEF1A1P1-201ENST00000447052 739 ntBASIC4.1□□□□□ -1.75
CCDC88CQ9P219 VN1R32P-201ENST00000452234 905 ntBASIC4.1□□□□□ -1.75
CCDC88CQ9P219 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 RPL35P6-201ENST00000490024 372 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms