Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC069213.2-201ENST00000420238 366 ntBASIC4.36□□□□□ -1.71
TREX1Q9NSU2 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 IPMKP1-201ENST00000425988 855 ntBASIC4.36□□□□□ -1.71
TREX1Q9NSU2 DYNLL1P7-201ENST00000429273 258 ntBASIC4.36□□□□□ -1.71
TREX1Q9NSU2 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 RAB9AP5-201ENST00000437794 597 ntBASIC4.36□□□□□ -1.71
TREX1Q9NSU2 RAB9AP2-201ENST00000443911 597 ntBASIC4.36□□□□□ -1.71
TREX1Q9NSU2 AL035551.1-201ENST00000446931 348 ntBASIC4.36□□□□□ -1.71
TREX1Q9NSU2 RPL35AP15-201ENST00000468042 339 ntBASIC4.36□□□□□ -1.71
TREX1Q9NSU2 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 PPBPP1-201ENST00000510807 373 ntBASIC4.36□□□□□ -1.71
TREX1Q9NSU2 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 AC068446.3-201ENST00000555285 382 ntBASIC4.36□□□□□ -1.71
TREX1Q9NSU2 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 RN7SL176P-201ENST00000580352 264 ntBASIC4.36□□□□□ -1.71
TREX1Q9NSU2 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 AC233280.2-201ENST00000603917 1070 ntBASIC4.36□□□□□ -1.71
TREX1Q9NSU2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 BX005019.1-201ENST00000561881 1810 ntBASIC4.35□□□□□ -1.71
TREX1Q9NSU2 AP000756.2-201ENST00000624168 2567 ntBASIC4.35□□□□□ -1.71
TREX1Q9NSU2 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 RNA5SP505-201ENST00000364748 108 ntBASIC4.35□□□□□ -1.71
TREX1Q9NSU2 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 AL356387.2-201ENST00000422272 243 ntBASIC4.35□□□□□ -1.71
TREX1Q9NSU2 EIF4EP1-201ENST00000422311 642 ntBASIC4.35□□□□□ -1.71
TREX1Q9NSU2 TRGV7-201ENST00000427089 353 ntBASIC4.35□□□□□ -1.71
TREX1Q9NSU2 PRELID3BP10-201ENST00000431957 584 ntBASIC4.35□□□□□ -1.71
TREX1Q9NSU2 RPL7P33-201ENST00000444159 742 ntBASIC4.35□□□□□ -1.71
TREX1Q9NSU2 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 RPL23AP72-201ENST00000492447 435 ntBASIC4.35□□□□□ -1.71
TREX1Q9NSU2 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 MTCYBP19-201ENST00000517463 1124 ntBASIC4.35□□□□□ -1.71
TREX1Q9NSU2 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.35□□□□□ -1.71
TREX1Q9NSU2 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 AC025423.2-201ENST00000537570 439 ntBASIC4.35□□□□□ -1.71
TREX1Q9NSU2 RPL12P25-202ENST00000598100 674 ntBASIC4.35□□□□□ -1.71
TREX1Q9NSU2 AC090948.2-201ENST00000607363 564 ntBASIC4.35□□□□□ -1.71
TREX1Q9NSU2 AL021997.2-201ENST00000615674 271 ntBASIC4.35□□□□□ -1.71
TREX1Q9NSU2 AL669942.2-201ENST00000620352 697 ntBASIC4.35□□□□□ -1.71
TREX1Q9NSU2 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
TREX1Q9NSU2 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
TREX1Q9NSU2 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
TREX1Q9NSU2 MFSD8-242ENST00000641690 4199 ntBASIC4.34□□□□□ -1.71
TREX1Q9NSU2 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
TREX1Q9NSU2 MIR331-201ENST00000362302 94 ntBASIC4.34□□□□□ -1.71
TREX1Q9NSU2 MIR365B-201ENST00000362317 111 ntBASIC4.34□□□□□ -1.71
TREX1Q9NSU2 HSPD1P16-201ENST00000402302 394 ntBASIC4.34□□□□□ -1.71
TREX1Q9NSU2 SNORA11F-201ENST00000408237 128 ntBASIC4.34□□□□□ -1.71
TREX1Q9NSU2 AC119751.6-201ENST00000416712 186 ntBASIC4.34□□□□□ -1.71
TREX1Q9NSU2 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.34□□□□□ -1.71
TREX1Q9NSU2 AC022022.1-201ENST00000430304 178 ntBASIC4.34□□□□□ -1.71
TREX1Q9NSU2 NFYAP1-201ENST00000431953 972 ntBASIC4.34□□□□□ -1.71
TREX1Q9NSU2 LYPLA1P1-201ENST00000434514 622 ntBASIC4.34□□□□□ -1.71
TREX1Q9NSU2 RPL12P46-201ENST00000436610 195 ntBASIC4.34□□□□□ -1.71
TREX1Q9NSU2 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.34□□□□□ -1.71
TREX1Q9NSU2 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.34□□□□□ -1.71
TREX1Q9NSU2 CASP3P1-201ENST00000446037 609 ntBASIC4.34□□□□□ -1.71
TREX1Q9NSU2 AL162388.1-201ENST00000450912 352 ntBASIC4.34□□□□□ -1.71
TREX1Q9NSU2 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.34□□□□□ -1.71
TREX1Q9NSU2 AL354710.1-201ENST00000453641 246 ntBASIC4.34□□□□□ -1.71
TREX1Q9NSU2 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.34□□□□□ -1.71
TREX1Q9NSU2 RPL7P22-201ENST00000466005 733 ntBASIC4.34□□□□□ -1.71
TREX1Q9NSU2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.34□□□□□ -1.71
TREX1Q9NSU2 AC104164.2-201ENST00000496953 495 ntBASIC4.34□□□□□ -1.71
TREX1Q9NSU2 AC111000.3-201ENST00000508057 576 ntBASIC4.34□□□□□ -1.71
TREX1Q9NSU2 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms