Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MIR6758-201ENST00000620653 63 ntBASIC4.5□□□□□ -1.69
CISHQ9NSE2 AC138907.10-201ENST00000623708 983 ntBASIC4.5□□□□□ -1.69
CISHQ9NSE2 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CISHQ9NSE2 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.5□□□□□ -1.69
CISHQ9NSE2 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CISHQ9NSE2 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.5□□□□□ -1.69
CISHQ9NSE2 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CISHQ9NSE2 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CISHQ9NSE2 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CISHQ9NSE2 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CISHQ9NSE2 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CISHQ9NSE2 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CISHQ9NSE2 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 MIR383-201ENST00000362257 73 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 AL050305.1-201ENST00000399993 1230 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 RN7SKP182-201ENST00000410772 298 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 RANP7-201ENST00000418085 644 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 COX6B1P7-201ENST00000430845 235 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CISHQ9NSE2 BTF3P10-201ENST00000433415 495 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 NDUFA5P9-201ENST00000472609 340 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 RPL21P6-201ENST00000479171 504 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 AC105137.1-201ENST00000484355 562 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 AF213884.1-201ENST00000488102 463 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 AC026979.1-201ENST00000492525 396 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 AC083829.1-201ENST00000503756 657 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 OR51K1P-201ENST00000510214 950 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CISHQ9NSE2 AC105233.3-201ENST00000531125 744 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 AC124068.1-201ENST00000563131 678 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 AC023575.1-201ENST00000580510 358 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 ARF4P1-201ENST00000605447 541 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 MIR378J-201ENST00000611988 109 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 AL445567.2-201ENST00000618935 498 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CISHQ9NSE2 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CISHQ9NSE2 AL133243.3-201ENST00000617415 3004 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 NEAT1-202ENST00000501122 22743 ntBASIC4.49□□□□□ -1.69
CISHQ9NSE2 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.49□□□□□ -1.69
CISHQ9NSE2 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.48□□□□□ -1.69
CISHQ9NSE2 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CISHQ9NSE2 MAPK10-304ENST00000641341 3984 ntBASIC4.48□□□□□ -1.69
CISHQ9NSE2 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CISHQ9NSE2 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CISHQ9NSE2 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
CISHQ9NSE2 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CISHQ9NSE2 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CISHQ9NSE2 RNA5SP296-201ENST00000410523 111 ntBASIC4.48□□□□□ -1.69
CISHQ9NSE2 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.48□□□□□ -1.69
CISHQ9NSE2 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.48□□□□□ -1.69
CISHQ9NSE2 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.48□□□□□ -1.69
CISHQ9NSE2 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.48□□□□□ -1.69
CISHQ9NSE2 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.48□□□□□ -1.69
CISHQ9NSE2 HLA-N-201ENST00000437516 135 ntBASIC4.48□□□□□ -1.69
CISHQ9NSE2 RPL23AP89-201ENST00000439324 255 ntBASIC4.48□□□□□ -1.69
CISHQ9NSE2 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.48□□□□□ -1.69
CISHQ9NSE2 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CISHQ9NSE2 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.48□□□□□ -1.69
CISHQ9NSE2 AC099522.1-202ENST00000514718 367 ntBASIC4.48□□□□□ -1.69
CISHQ9NSE2 RNA5SP360-201ENST00000516555 118 ntBASIC4.48□□□□□ -1.69
CISHQ9NSE2 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.48□□□□□ -1.69
CISHQ9NSE2 CYCSP29-201ENST00000533731 318 ntBASIC4.48□□□□□ -1.69
CISHQ9NSE2 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.48□□□□□ -1.69
CISHQ9NSE2 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.48□□□□□ -1.69
CISHQ9NSE2 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.48□□□□□ -1.69
CISHQ9NSE2 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CISHQ9NSE2 CYP4A43P-201ENST00000568156 121 ntBASIC4.48□□□□□ -1.69
CISHQ9NSE2 MIR3939-201ENST00000582614 106 ntBASIC4.48□□□□□ -1.69
CISHQ9NSE2 MIR432-201ENST00000606207 94 ntBASIC4.48□□□□□ -1.69
CISHQ9NSE2 AL031666.3-201ENST00000609320 1006 ntBASIC4.48□□□□□ -1.69
CISHQ9NSE2 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.48□□□□□ -1.69
CISHQ9NSE2 AC064801.1-201ENST00000612025 407 ntBASIC4.48□□□□□ -1.69
CISHQ9NSE2 AL669942.2-201ENST00000620352 697 ntBASIC4.48□□□□□ -1.69
CISHQ9NSE2 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.48□□□□□ -1.69
CISHQ9NSE2 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CISHQ9NSE2 LARP1BP1-201ENST00000506036 1359 ntBASIC4.48□□□□□ -1.69
CISHQ9NSE2 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CISHQ9NSE2 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CISHQ9NSE2 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CISHQ9NSE2 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms