Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC022884.3-201ENST00000579571 248 ntBASIC4.63□□□□□ -1.67
LRRC40Q9H9A6 SS18L2P2-201ENST00000583960 235 ntBASIC4.63□□□□□ -1.67
LRRC40Q9H9A6 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.63□□□□□ -1.67
LRRC40Q9H9A6 SLC25A36P1-201ENST00000590111 465 ntBASIC4.63□□□□□ -1.67
LRRC40Q9H9A6 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.63□□□□□ -1.67
LRRC40Q9H9A6 AC016957.2-201ENST00000616998 848 ntBASIC4.63□□□□□ -1.67
LRRC40Q9H9A6 AC091905.2-201ENST00000623143 306 ntBASIC4.63□□□□□ -1.67
LRRC40Q9H9A6 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.63□□□□□ -1.67
LRRC40Q9H9A6 AC006971.1-201ENST00000407916 4486 ntBASIC4.63□□□□□ -1.67
LRRC40Q9H9A6 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.63□□□□□ -1.67
LRRC40Q9H9A6 AC010928.1-201ENST00000592477 1447 ntBASIC4.63□□□□□ -1.67
LRRC40Q9H9A6 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LRRC40Q9H9A6 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
LRRC40Q9H9A6 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 OR52B1P-201ENST00000316506 909 ntBASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 RNU6-666P-201ENST00000363499 107 ntBASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 AL355994.1-201ENST00000424379 260 ntBASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 RPL12P3-201ENST00000440080 396 ntBASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 IFNWP4-201ENST00000453148 294 ntBASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 MTND6P6-201ENST00000478031 263 ntBASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 AC012158.1-204ENST00000483430 465 ntBASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 AC090151.1-201ENST00000520784 730 ntBASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 BNIP3P32-201ENST00000600015 554 ntBASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 AL133338.2-201ENST00000604292 736 ntBASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LRRC40Q9H9A6 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 AC021146.4-201ENST00000309229 279 ntBASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 RNU1-94P-201ENST00000362627 173 ntBASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 RNA5SP151-201ENST00000365632 117 ntBASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 OR1F12-201ENST00000402365 945 ntBASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 RPL26P37-201ENST00000411983 438 ntBASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 TRGV6-201ENST00000417928 299 ntBASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 RAD23BP1-201ENST00000421404 1227 ntBASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 SEC63P1-201ENST00000425785 1258 ntBASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 RAD1P2-201ENST00000446414 663 ntBASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 RNU7-27P-201ENST00000459281 62 ntBASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 AC006967.1-201ENST00000467608 589 ntBASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 HIGD1AP18-201ENST00000520730 278 ntBASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 AC009268.1-201ENST00000561352 1203 ntBASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 MIR4436B2-201ENST00000581415 91 ntBASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 MIR4436B1-201ENST00000583272 91 ntBASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 BPIFA4P-203ENST00000603168 689 ntBASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 AC026979.4-201ENST00000606555 645 ntBASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 LINC00901.1-201ENST00000617252 152 ntBASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 VN2R3P-201ENST00000422626 1412 ntBASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRRC40Q9H9A6 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 RNU6-819P-201ENST00000364116 107 ntBASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 HDGFP1-201ENST00000405943 252 ntBASIC4.6□□□□□ -1.67
LRRC40Q9H9A6 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms