Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 MTCO3P38-201ENST00000468910 766 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS11Q9H270 AC004815.1-201ENST00000484185 331 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 HMGB1P36-201ENST00000487709 576 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS11Q9H270 GTF2F2P1-201ENST00000511083 675 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 RNU6-528P-201ENST00000516926 100 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 RNU6-1028P-201ENST00000517164 93 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS11Q9H270 AC083923.1-201ENST00000523708 376 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 AP005639.2-201ENST00000527592 928 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 PDCL2P2-201ENST00000533651 189 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS11Q9H270 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS11Q9H270 AC091078.2-201ENST00000557145 559 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS11Q9H270 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS11Q9H270 MIR4660-201ENST00000583549 74 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 OR4G1P-201ENST00000588632 938 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS11Q9H270 VN1R83P-201ENST00000595685 445 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 AL137072.1-201ENST00000603444 466 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
VPS11Q9H270 AL158211.4-201ENST00000606988 584 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 AC092954.2-201ENST00000609103 430 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 uc_338.31-201ENST00000615595 186 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 MIR6721-201ENST00000617181 87 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 AC009509.4-201ENST00000619202 509 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS11Q9H270 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS11Q9H270 U6.107-201ENST00000637108 79 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS11Q9H270 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
VPS11Q9H270 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS11Q9H270 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS11Q9H270 OR4F13P-202ENST00000560066 2054 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS11Q9H270 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS11Q9H270 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS11Q9H270 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VPS11Q9H270 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS11Q9H270 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS11Q9H270 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS11Q9H270 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS11Q9H270 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS11Q9H270 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS11Q9H270 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS11Q9H270 LYARP1-201ENST00000436977 1501 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VPS11Q9H270 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VPS11Q9H270 MIR130B-202ENST00000385018 82 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 SNORD65C-201ENST00000390962 71 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 U3.28-201ENST00000391249 210 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS11Q9H270 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS11Q9H270 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS11Q9H270 Z82198.3-201ENST00000421145 199 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 MTND1P14-201ENST00000427400 950 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.7□□□□□ -1.5
VPS11Q9H270 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS11Q9H270 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS11Q9H270 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS11Q9H270 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS11Q9H270 NDUFB4P8-201ENST00000435351 367 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 PCBP2P1-201ENST00000437262 977 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 AC009263.1-201ENST00000441193 1239 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS11Q9H270 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS11Q9H270 AC068135.1-201ENST00000446164 246 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 AC005077.1-201ENST00000449226 375 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 OR51B8P-201ENST00000449892 769 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 AL935212.3-201ENST00000450729 284 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 AC093166.4-201ENST00000457867 318 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 RPS23P2-201ENST00000463671 415 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 HMGN1P10-201ENST00000474557 553 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS11Q9H270 AC109471.1-201ENST00000511631 612 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS11Q9H270 RN7SKP238-201ENST00000516483 249 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 RN7SKP35-201ENST00000517210 151 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS11Q9H270 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS11Q9H270 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS11Q9H270 AL139174.1-201ENST00000531489 886 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 MTND4LP24-201ENST00000572277 291 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 AC004067.1-201ENST00000608733 700 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 AL122125.1-201ENST00000616999 600 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS11Q9H270 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS11Q9H270 AC009878.1-201ENST00000621819 340 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.7□□□□□ -1.5
VPS11Q9H270 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS11Q9H270 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
VPS11Q9H270 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS11Q9H270 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS11Q9H270 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS11Q9H270 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS11Q9H270 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms