Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
TRAIPQ9BWF2 RNA5SP433-201ENST00000364491 114 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 RPS3AP23-201ENST00000401762 784 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 AL512430.2-201ENST00000406786 339 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 RN7SKP266-201ENST00000410232 287 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 TPMTP2-201ENST00000414372 726 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 OR5BE1P-201ENST00000425977 939 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 RPL36AP15-201ENST00000444514 266 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 MTCO1P27-201ENST00000448269 226 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 AL358876.1-201ENST00000453364 1075 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 SRRM1P2-201ENST00000464531 1192 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 TSACC-207ENST00000470342 601 ntTSL 2 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC7□□□□□ -1.29
TRAIPQ9BWF2 AC104563.1-201ENST00000476147 376 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 RPL7P24-201ENST00000493052 752 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 SNORA58-201ENST00000505219 137 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 AC022447.3-201ENST00000506865 495 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 FABP5P5-201ENST00000515537 406 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 RN7SKP298-201ENST00000515950 94 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 DYNLL1P1-201ENST00000595442 269 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 AP001437.1-201ENST00000608783 456 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 AC087241.4-201ENST00000612441 480 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 FAM157B-203ENST00000639350 358 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 OR5BE1P-202ENST00000641168 1176 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 AC011455.2-201ENST00000599320 3336 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC7□□□□□ -1.29
TRAIPQ9BWF2 EED-206ENST00000527888 1422 ntTSL 2 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7□□□□□ -1.29
TRAIPQ9BWF2 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 AC125336.1-201ENST00000508893 2827 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 AL592148.3-201ENST00000608771 2646 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 CARF-208ENST00000428585 2513 ntTSL 2 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AL450326.2-201ENST00000421913 1962 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 SNORD16-201ENST00000362803 99 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 RN7SKP275-201ENST00000364626 301 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 SNORA75-201ENST00000384158 137 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 RNU4-64P-201ENST00000410795 131 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 MTCO2P5-201ENST00000422621 426 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AL354707.3-201ENST00000427308 331 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 USP9YP14-201ENST00000430663 563 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 MTND5P14-201ENST00000441481 1267 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 PLGLA-201ENST00000465668 449 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AC093767.1-201ENST00000504523 156 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AC060775.1-201ENST00000518241 520 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 DUXAP2-201ENST00000519198 589 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 ZDHHC20P3-201ENST00000531576 336 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AC010546.1-201ENST00000569391 485 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 LARP7P2-201ENST00000575306 125 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 MTND1P15-201ENST00000579262 949 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 RPL23AP92-201ENST00000603609 255 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 NDUFA8P1-201ENST00000605525 367 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AC004492.1-201ENST00000607036 742 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AL513477.2-201ENST00000607858 568 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 Z95327.3-201ENST00000610385 572 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 Z99129.1-201ENST00000612510 255 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AC108479.2-201ENST00000617314 601 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 AC000123.2-201ENST00000623124 461 ntBASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRAIPQ9BWF2 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms