Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 BNIP3P32-201ENST00000600015 554 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 HMGB1P51-201ENST00000605166 638 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 FAM27B-201ENST00000610601 213 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AC074029.4-201ENST00000624796 1859 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
CCDC28BQ9BUN5 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
CCDC28BQ9BUN5 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 MAPK10-253ENST00000641010 4072 ntBASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 AL512283.1-201ENST00000606756 1384 ntBASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 AL078604.1-201ENST00000404609 466 ntBASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 AC062016.2-201ENST00000420950 676 ntBASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 AC234779.1-201ENST00000425910 285 ntBASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 RNF19BPX-201ENST00000426224 625 ntBASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 H2AFZP5-201ENST00000446960 382 ntBASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 AC004980.4-201ENST00000513375 203 ntBASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 AC006518.1-201ENST00000541449 943 ntBASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 MIMT1-201ENST00000597105 1050 ntBASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 AC010201.1-201ENST00000605051 540 ntBASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 AL391358.1-201ENST00000605342 190 ntBASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 HMGB1P50-201ENST00000605814 607 ntBASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 AL138721.1-201ENST00000616756 179 ntBASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 AC020978.9-201ENST00000624380 1141 ntBASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 AL138960.2-201ENST00000625145 535 ntBASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC28BQ9BUN5 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 AC027287.1-201ENST00000553115 1453 ntBASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 AC067945.1-201ENST00000342609 618 ntBASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 MTCO1P51-201ENST00000427672 1060 ntBASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 AL138787.1-202ENST00000437804 898 ntBASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 HMGB1P16-201ENST00000447155 540 ntBASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 AURKAPS2-201ENST00000454983 333 ntBASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 CYCSP53-201ENST00000455540 265 ntBASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 RN7SL172P-201ENST00000460535 303 ntBASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 AC092905.1-201ENST00000467527 949 ntBASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 UBA52P7-201ENST00000486088 380 ntBASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 AC011487.3-201ENST00000593607 453 ntBASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 AC023813.4-201ENST00000607580 580 ntBASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 LINC01739-205ENST00000641890 573 ntBASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 MAPK10-304ENST00000641341 3984 ntBASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 AL391684.1-202ENST00000641293 1636 ntBASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC28BQ9BUN5 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms