Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.9□□□□□ -1.31
USB1Q9BQ65 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
USB1Q9BQ65 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
USB1Q9BQ65 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
USB1Q9BQ65 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.9□□□□□ -1.31
USB1Q9BQ65 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
USB1Q9BQ65 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
USB1Q9BQ65 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 RNA5SP301-201ENST00000362537 121 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 RNU6-266P-201ENST00000364225 107 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 U3.11-201ENST00000364476 212 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 SNORA75.6-201ENST00000391318 127 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 POLHP1-201ENST00000411806 470 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 CRIP1P3-201ENST00000416794 220 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 AL139184.1-202ENST00000422303 222 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 RBMY2NP-201ENST00000434454 1028 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 AC019185.1-201ENST00000442718 389 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 GCNT1P5-201ENST00000449274 682 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 RPL10P6-201ENST00000457497 318 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 AL590326.1-201ENST00000460857 334 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 RN7SL55P-201ENST00000464534 297 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 RPL34P22-201ENST00000468193 318 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 AC114300.1-201ENST00000502347 280 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 AC026700.1-201ENST00000512074 544 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 AC114801.1-201ENST00000512633 297 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 AL355076.3-201ENST00000555838 587 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 AL627230.1-201ENST00000613077 211 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 AL355365.1-201ENST00000616480 294 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 CAP1P2-201ENST00000417455 1409 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 AC002525.1-201ENST00000624392 1622 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 NCOA4P3-201ENST00000513203 1877 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 AC008498.2-201ENST00000624033 2322 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 NLRP14-201ENST00000299481 3628 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
USB1Q9BQ65 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 AC104964.2-201ENST00000562242 4641 ntBASIC6.89□□□□□ -1.31
USB1Q9BQ65 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USB1Q9BQ65 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
USB1Q9BQ65 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USB1Q9BQ65 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
USB1Q9BQ65 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USB1Q9BQ65 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USB1Q9BQ65 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
USB1Q9BQ65 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USB1Q9BQ65 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AC011460.1-201ENST00000636268 1834 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms