Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.69□□□□□ -1.66
RPRD1AQ96P16 AC107905.1-201ENST00000616204 426 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 AC234782.5-201ENST00000617723 324 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 RMST_5.1-201ENST00000618704 126 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 AC105105.5-201ENST00000622635 1294 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 AC002044.3-201ENST00000623314 541 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RPRD1AQ96P16 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 RN7SKP216-201ENST00000411050 312 ntBASIC4.68□□□□□ -1.66
RPRD1AQ96P16 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 AL807761.1-201ENST00000417622 171 ntBASIC4.68□□□□□ -1.66
RPRD1AQ96P16 AC009480.2-201ENST00000422916 432 ntBASIC4.68□□□□□ -1.66
RPRD1AQ96P16 RPS26P47-201ENST00000427219 348 ntBASIC4.68□□□□□ -1.66
RPRD1AQ96P16 AC022022.1-201ENST00000430304 178 ntBASIC4.68□□□□□ -1.66
RPRD1AQ96P16 NDUFA5P1-201ENST00000433858 341 ntBASIC4.68□□□□□ -1.66
RPRD1AQ96P16 AL392003.1-201ENST00000434394 243 ntBASIC4.68□□□□□ -1.66
RPRD1AQ96P16 FHP1-201ENST00000442741 703 ntBASIC4.68□□□□□ -1.66
RPRD1AQ96P16 CCRL1P1-201ENST00000449542 1053 ntBASIC4.68□□□□□ -1.66
RPRD1AQ96P16 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 OR8X1P-201ENST00000534542 869 ntBASIC4.68□□□□□ -1.66
RPRD1AQ96P16 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 AL590410.1-201ENST00000617925 333 ntBASIC4.68□□□□□ -1.66
RPRD1AQ96P16 AC010435.1-201ENST00000623353 1177 ntBASIC4.68□□□□□ -1.66
RPRD1AQ96P16 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 AC091046.3-201ENST00000631455 1574 ntBASIC4.68□□□□□ -1.66
RPRD1AQ96P16 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 RAD17P1-201ENST00000418130 2042 ntBASIC4.68□□□□□ -1.66
RPRD1AQ96P16 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 OR56B2P-202ENST00000641377 2453 ntBASIC4.68□□□□□ -1.66
RPRD1AQ96P16 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 AL137100.1-201ENST00000556703 1620 ntBASIC4.68□□□□□ -1.66
RPRD1AQ96P16 AC090017.1-201ENST00000548612 1779 ntBASIC4.68□□□□□ -1.66
RPRD1AQ96P16 AL672167.1-203ENST00000641299 2975 ntBASIC4.68□□□□□ -1.66
RPRD1AQ96P16 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPRD1AQ96P16 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 MAPK10-303ENST00000641324 3959 ntBASIC4.67□□□□□ -1.66
RPRD1AQ96P16 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 SCN1A-220ENST00000641603 12506 ntBASIC4.67□□□□□ -1.66
RPRD1AQ96P16 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 RNU1-94P-201ENST00000362627 173 ntBASIC4.67□□□□□ -1.66
RPRD1AQ96P16 MIR708-201ENST00000390708 88 ntBASIC4.67□□□□□ -1.66
RPRD1AQ96P16 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 RPL7AP25-201ENST00000423357 805 ntBASIC4.67□□□□□ -1.66
RPRD1AQ96P16 Z74021.1-201ENST00000423610 407 ntBASIC4.67□□□□□ -1.66
RPRD1AQ96P16 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 EIF4A1P11-201ENST00000451239 222 ntBASIC4.67□□□□□ -1.66
RPRD1AQ96P16 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 RPL21P126-201ENST00000470049 478 ntBASIC4.67□□□□□ -1.66
RPRD1AQ96P16 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.67□□□□□ -1.66
RPRD1AQ96P16 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 HMGB3P26-201ENST00000560051 582 ntBASIC4.67□□□□□ -1.66
RPRD1AQ96P16 AC090312.1-201ENST00000580637 348 ntBASIC4.67□□□□□ -1.66
RPRD1AQ96P16 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 AC091178.1-203ENST00000584586 279 ntBASIC4.67□□□□□ -1.66
RPRD1AQ96P16 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.67□□□□□ -1.66
RPRD1AQ96P16 AC027290.2-201ENST00000623210 18662 ntBASIC4.67□□□□□ -1.66
RPRD1AQ96P16 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.67□□□□□ -1.66
RPRD1AQ96P16 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.66□□□□□ -1.66
RPRD1AQ96P16 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.66□□□□□ -1.66
RPRD1AQ96P16 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms